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  Chromosome 5 - YAC Map - Single Contig
 

Chromosome 5 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023195
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023195AC112204377770371D5S3955117.002AC116333, AC112204, AC112486, AC116333
S/G/Y/R/B/O NT_023195AC116333377047521      
S/G/Y/R/B/O NT_023195AC008860379522493D5S20255115.001AC016612, AC008860, AC008947, AC016612
S/G/Y/R/B/O NT_023195AC016612379739923D5S4555119.001AC022136, AC016612, AC022136, AC025444
S/G/Y/R/B/O NT_023195AC008942381720823WI-69265116.001AC008807, AC008807, AC008942
S/G/Y/R/B/O NT_023195AC008807382632283AFM303TH55118.001AC026439, AC026439
S/G/Y/R/B/O NT_023195AC026439382759703WI-51935113.001AC114277, AC026439, AC114277
S/G/Y/R/B/O NT_023195AC026439382770553D5S20855114.001AC114277, AC026439, AC114277
S/G/Y/R/B/O NT_023195AC114277383248313      
S/G/Y/R/B/O NT_023195AC114950383994243D5S19945110.001AC026724, AC026724, AC092281, AC114950
S/G/Y/R/B/O NT_023195AC026724384128061AFMB296XF15112.001 AC026724, AC092281
S/G/Y/R/B/O NT_023195AC010631385043393      
S/G/Y/R/B/O NT_023195AC008957386178853      
S/G/Y/R/B/O NT_023195AC026463387389613WI-37985111.001 AC010386, AC026463
S/G/Y/R/B/O NT_023195AC026741388399383      
S/G/Y/R/B/O NT_023195AC008902390433663WI-36985109.001AC008925, AC008902, AC008925, AC019267
S/G/Y/R/B/O NT_023195AC008925390489943      
S/G/Y/R/B/O NT_023195AC025449392825793WI-51585108.001AF165926, AC008832, AC025449, AF165926
S/G/Y/R/B/O NT_023195AF165926393259373      
S/G/Y/R/B/O NT_023195AC053526394191241      
S/G/Y/R/B/O NT_023195AC068049394515761      
S/G/Y/R/B/O NT_023195AC025469395060822      
S/G/Y/R/B/O NT_023195AC093269395848491      
S/G/Y/R/B/O NT_023195AC093261396083921      
S/G/Y/R/B/O NT_023195AC008869397769463D5S20215107.001AC093261, AC008869, AC093261, AC108087
S/G/Y/R/B/O NT_023195AC034226400189553D5S21055120.001 AC034226
S/G/Y/R/B/O NT_023195AC074129400429773      
S/G/Y/R/B/O NT_023195AC091430400450423      
S/G/Y/R/B/O NT_023195AC010338401353373AFMA223WF95121.001AC010351, AC010338, AC010351
S/G/Y/R/B/O NT_023195AC010351402302983      
S/G/Y/R/B/O NT_023195AC091839404012633AFMA274WC95123.001AC010457, AC010457
S/G/Y/R/B/O NT_023195AC010457404362523WI-69585124.001 AC010457
S/G/Y/R/B/O NT_023195AC091823404700013      
S/G/Y/R/B/O NT_023195AC010425405959363CHLC.GATA2A035122.001 AC010425, AC016324
S/G/Y/R/B/O NT_023195AC091435406634323      
S/G/Y/R/B/O NT_023195AC026713408976233WI-87145125.001AC016719, AC109467, AC010938, AC016719, AC026713, AC109467
S/G/Y/R/B/O NT_023195AC016719409010191      
S/G/Y/R/B/O NT_023195AC109467409362762      
S/G/Y/R/B/O NT_023195AC008964409393833      
S/G/Y/R/B/O NT_023195AC010633410832243      
S/G/Y/R/B/O NT_023195AC025471412444973UTR-96795126.002AC022135, AC007914, AC008968, AC015575, AC022135, AC025471
S/G/Y/R/B/O NT_023195AC008846413326993NIB17105127.001 AC007914, AC008846, AC015575, AC069179, AF205890
S/G/Y/R/B/O NT_023195AC008916413706323      
S/G/Y/R/B/O NT_023195AC008959414868743WI-6265129.001AC026708, AC008959, AC026708
S/G/Y/R/B/O NT_023195AC026708416016823CHLC.GATA22B045128.001AC027475, AC026708, AC027475
S/G/Y/R/B/O NT_023195AC091886416044863      
S/G/Y/R/B/O NT_023195AC027475416480821      
S/G/Y/R/B/O NT_023195AC093217416495081      
S/G/Y/R/B/O NT_023195AC026209416602101      
S/G/Y/R/B/O NT_023195AC027504417141661      


  NT_023195 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023195AC108105417212841      
S/G/Y/R/B/O NT_023195AC116363419546531D5S4185131.001AC027504, AC092288, AC027504, AC092288, AC116363
S/G/Y/R/B/O NT_023195AC114320417399113      
S/G/Y/R/B/O NT_023195AC008820417846903D5S5015130.001 AC008820
S/G/Y/R/B/O NT_023195AC026714418299763      
S/G/Y/R/B/O NT_023195AC092288419819262      
S/G/Y/R/B/O NT_023195AC109494419995162      
S/G/Y/R/B/O NT_023195AC010165420777043WI-27155132.001AC008842, AC109494, AC008842, AC010165, AC109494
S/G/Y/R/B/O NT_023195AC010165421571893CHLC.GATA4D045133.001 AC022241
S/G/Y/R/B/O NT_023195AC008842421849843      
S/G/Y/R/B/O NT_023195AC110001421976563      
S/G/Y/R/B/O NT_023195AC016369422323501      
S/G/Y/R/B/O NT_023195AC093277423415491      
S/G/Y/R/B/O NT_023195AC114977423865431      
S/G/Y/R/B/O NT_023195AC093264426308633WI-60435135.001 AC093264
S/G/Y/R/B/O NT_023195AC093264426754233WI-23395134.001AC008810, AC008810, AC025758, AC093264
S/G/Y/R/B/O NT_023195AC008810426899773      
S/G/Y/R/B/O NT_023195AC008922427828533      
S/G/Y/R/B/O NT_023195AC026732428258643      
S/G/Y/R/B/O NT_023195AC114967428862021      
S/G/Y/R/B/O NT_023195AC067784429726451CHLC.GATA21D045137.001AC114967, AC018595, AC067784, AC114967
S/G/Y/R/B/O NT_023195AC008863430815283WI-88775138.001AC091871, AC008863, AC091871
S/G/Y/R/B/O NT_023195AC091871431174441      
S/G/Y/R/B/O NT_023195AC016332431378651      
S/G/Y/R/B/O NT_023195AC008830432677413D5S6345139.001AC016332, AC016332
S/G/Y/R/B/O NT_023195AC008830433295273D5S4205141.001AC016332, AC094082, AC008830, AC016332, AC022141, AC094082
S/G/Y/R/B/O NT_023195AC094082433560711D5S4305140.001AC008830, AC021600, AC008830, AC021600, AC022141, AC094082
S/G/Y/R/B/O NT_023195AC021600433648141      
S/G/Y/R/B/O NT_023195AC020940433984611      
S/G/Y/R/B/O NT_023195AC109453434050931      
S/G/Y/R/B/O NT_023195AC025649434315621      
S/G/Y/R/B/O NT_023195AC008817437304983AFMB316YE55142.002AC114946, AC114946
S/G/Y/R/B/O NT_023195AC008817437401813AFM349XF55147.002AC114946, AC008817, AC025384, AC114946
S/G/Y/R/B/O NT_023195AC008817437516483NIB18875143.002AC114946, AC008817, AC025384, AC114946
S/G/Y/R/B/O NT_023195AC114946437678791      
S/G/Y/R/B/O NT_023195AC010408437903341      
S/G/Y/R/B/O NT_023195AC034222438394622      
S/G/Y/R/B/O NT_023195AC022972439882181      
S/G/Y/R/B/O NT_023195AC008912440479023D5S20825144.001 AC008912
S/G/Y/R/B/O NT_023195AC108099441245793      
S/G/Y/R/B/O NT_023195AC104114442618293      
S/G/Y/R/B/O NT_023195AC026655442794151      
S/G/Y/R/B/O NT_023195 - WI-96975136.005AC008810, AC008922, AB061834, AC008810, AC008922, AC025758