Chromosome 5 - YAC Map - Single Contig
Chromosome 5 - YAC Map - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Map Page
Whole Chromosome
Single Contigs
Line color code:
White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086
NT_023089
NT_006576
NT_033103
NT_029977
NT_016779
NT_033104
NT_023110
NT_033119
NT_023097
NT_023084
NT_023115
NT_023315
NT_033112
NT_006547
NT_023162
NT_006577
NT_023114
NT_023216
NT_023124
NT_026281
NT_023085
NT_033113
NT_033110
NT_006679
NT_023195
NT_033085
NT_006702
NT_023098
NT_028188
NT_031794
NT_023102
NT_023081
NT_006693
NT_016864
NT_033115
NT_033092
NT_006665
NT_006497
NT_006431
NT_033093
NT_006790
NT_006713
NT_026283
NT_023083
NT_033077
NT_033111
NT_033079
NT_007022
NT_006540
NT_030680
NT_029973
NT_028179
NT_033118
NT_006731
NT_023148
NT_023290
NT_033094
NT_033116
NT_006654
NT_033095
NT_033098
NT_033082
NT_033096
NT_023091
NT_006789
NT_033108
NT_006899
NT_006780
NT_030685
NT_025721
NT_033106
NT_025702
NT_023192
NT_029295
NT_033097
NT_016755
NT_029975
NT_033083
NT_033084
NT_023238
NT_033105
NT_007072
NT_033091
NT_016714
NT_006859
NT_006489
NT_029289
NT_033078
NT_023269
NT_023248
NT_030691
NT_006788
NT_030698
NT_033117
NT_033080
NT_023133
NT_006907
NT_023132
NT_033089
NT_006725
NT_023093
NT_006802
NT_006932
NT_006519
NT_025702
Links
Contig
Accession
Chr Start
Phs
STS Marker
YAC Chr
WI YAC
Plc
Other Accessions in Assembly
All Accessions
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC027320
123692607
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC008475
123832956
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC035144
123855748
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC026795
123945575
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC024564
124080278
3
CHLC.ATA21C09
5
409.00
1
AC010409
,
AC010409, AC068029
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC010409
124097672
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC008550
124167928
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC010348
124278499
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC093272
124357106
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC113421
124364018
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC114309
124382589
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC008574
124427972
3
WI-696
5
410.00
1
AC113421
,
AC008553, AC008574, AC113421
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC108095
124439260
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC024566
124588362
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
AC109447
124647170
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_025702
 
-
 
AFM331XD5
5
408.00
1
AC008629
,
AC017044
,
AC008629, AC017044