Chromosome 5 - YAC Map - Single Contig
Chromosome 5 - YAC Map - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Map Page
Whole Chromosome
Single Contigs
Line color code:
White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086
NT_023089
NT_006576
NT_033103
NT_029977
NT_016779
NT_033104
NT_023110
NT_033119
NT_023097
NT_023084
NT_023115
NT_023315
NT_033112
NT_006547
NT_023162
NT_006577
NT_023114
NT_023216
NT_023124
NT_026281
NT_023085
NT_033113
NT_033110
NT_006679
NT_023195
NT_033085
NT_006702
NT_023098
NT_028188
NT_031794
NT_023102
NT_023081
NT_006693
NT_016864
NT_033115
NT_033092
NT_006665
NT_006497
NT_006431
NT_033093
NT_006790
NT_006713
NT_026283
NT_023083
NT_033077
NT_033111
NT_033079
NT_007022
NT_006540
NT_030680
NT_029973
NT_028179
NT_033118
NT_006731
NT_023148
NT_023290
NT_033094
NT_033116
NT_006654
NT_033095
NT_033098
NT_033082
NT_033096
NT_023091
NT_006789
NT_033108
NT_006899
NT_006780
NT_030685
NT_025721
NT_033106
NT_025702
NT_023192
NT_029295
NT_033097
NT_016755
NT_029975
NT_033083
NT_033084
NT_023238
NT_033105
NT_007072
NT_033091
NT_016714
NT_006859
NT_006489
NT_029289
NT_033078
NT_023269
NT_023248
NT_030691
NT_006788
NT_030698
NT_033117
NT_033080
NT_023133
NT_006907
NT_023132
NT_033089
NT_006725
NT_023093
NT_006802
NT_006932
NT_006519
NT_023162
Links
Contig
Accession
Chr Start
Phs
STS Marker
YAC Chr
WI YAC
Plc
Other Accessions in Assembly
All Accessions
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC114282
26784701
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC093294
26959655
3
CHLC.GGAT3H04.1630
5
72.00
1
AC112174
,
AC113370
,
AC093294, AC112174, AC113370
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC112174
26982155
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC113370
26996621
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC113431
27128934
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC025475
27208122
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC010483
27394584
3
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC026426
27450973
3
CHLC.GATA52G02
5
74.00
1
 
AC026426
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC113347
27500401
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC025760
27552461
3
D5S419
5
75.00
1
AC113347
,
AC025760, AC113347
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC027333
27642795
3
D5S627
5
76.00
1
AC027321
,
AC027321, AC027333
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC022450
27752944
2
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC027321
27755590
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC010470
28001254
3
WI-5826
5
77.00
1
 
AC010470
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC093308
28047865
1
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_023162
AC112193
28052127
1