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  Chromosome 5 - YAC Map - Single Contig
 

Chromosome 5 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023132
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023132AC0273091790945671      
S/G/Y/R/B/O NT_023132AC0319871791154511      
S/G/Y/R/B/O NT_023132AC0102391791235902      
S/G/Y/R/B/O NT_023132AC0086711791492802      
S/G/Y/R/B/O NT_023132AC0245611792778683STSG-103095636.001AC008671, AC008671, AC024561
S/G/Y/R/B/O NT_023132AC0922711794004113D5S19605638.001 AC092271
S/G/Y/R/B/O NT_023132AC1133421794391953D5S4255637.001AC092271, AC092271
S/G/Y/R/B/O NT_023132AC0113871795738223D5S4295635.001 AC007427
S/G/Y/R/B/O NT_023132AC0114101797158693D5S4625634.001 AC007427, AC011358, AC011410
S/G/Y/R/B/O NT_023132AC0224401797332373      
S/G/Y/R/B/O NT_023132AC0224261798003833      
S/G/Y/R/B/O NT_023132AC0114001799457453WI-58835631.001 AC011400
S/G/Y/R/B/O NT_023132AC0114001799462773WI-54215630.001 AC011400
S/G/Y/R/B/O NT_023132AC0114001799463783WI-48975632.001 AC011400
S/G/Y/R/B/O NT_023132AC0932461800138853CHLC.GATA87F105629.001AC011400, AC011400, AC093246
S/G/Y/R/B/O NT_023132AC0919801800850383      
S/G/Y/R/B/O NT_023132AC0103061802381711      
S/G/Y/R/B/O NT_023132AC1149361802561921      
S/G/Y/R/B/O NT_023132AC0222171803977583      
S/G/Y/R/B/O NT_023132AC1100111805917182      
S/G/Y/R/B/O NT_023132AC0084291806041351      
S/G/Y/R/B/O NT_023132AC0211591807282151      
S/G/Y/R/B/O NT_023132AC0114071807304633      
S/G/Y/R/B/O NT_023132AC0900641809221651WI-29985633.001AC011407, AC011407, AC090064
S/G/Y/R/B/O NT_023132AC0083781811528773WI-68225640.001AL669821, AC008378, AC008412, AC010257, AL669821
S/G/Y/R/B/O NT_023132AC0083781811547893D5S3945641.001 AC008378, AC010257
S/G/Y/R/B/O NT_023132AL6698211811617601      
S/G/Y/R/B/O NT_023132AL6699241811803412      
S/G/Y/R/B/O NT_023132AC0087131812986812      
S/G/Y/R/B/O NT_023132AC1067311813313782      
S/G/Y/R/B/O NT_023132AC0165731814331073WI-11025639.001AC008632, AC008632, AC016573, AC022259
S/G/Y/R/B/O NT_023132AC0086321814338913      
S/G/Y/R/B/O NT_023132AC0086631815405013      
S/G/Y/R/B/O NT_023132AC0103391816631413D5S20695642.001AC008674, AC008674, AC010339
S/G/Y/R/B/O NT_023132AC0086741817080713D5S6775643.001 AC008674
S/G/Y/R/B/O NT_023132AC0086741818100223D5S2115644.001AC010452, AC008674, AC010452, AC017043
S/G/Y/R/B/O NT_023132AC0104521818114691      
S/G/Y/R/B/O NT_023132AC0932751818299492      
S/G/Y/R/B/O NT_023132AC0234041819532401      
S/G/Y/R/B/O NT_023132AC1134231819533853      
S/G/Y/R/B/O NT_023132AC0087141820771392      
S/G/Y/R/B/O NT_023132AC0933101820975961WI-67365645.001AC008714, AC008714, AC093222, AC093310
S/G/Y/R/B/O NT_023132AC1067951821271451      
S/G/Y/R/B/O NT_023132AC1164271822573713      
S/G/Y/R/B/O NT_023132AC0084691823189263      
S/G/Y/R/B/O NT_023132AC1085091824053233      
S/G/Y/R/B/O NT_023132AC0084541824845673      
S/G/Y/R/B/O NT_023132AC1068251826200803      
S/G/Y/R/B/O NT_023132AC0102411826329993      
S/G/Y/R/B/O NT_023132AC0187601827405663      


  NT_023132 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023132AC0102191828191493      
S/G/Y/R/B/O NT_023132AC0267151829471711      
S/G/Y/R/B/O NT_023132AC0342001830351283      
S/G/Y/R/B/O NT_023132AC0913931831808483WI-75545654.001AC020903, AC020903
S/G/Y/R/B/O NT_023132AC0913931832633983WI-59245655.001 AC008399, AC025713, AC091393
S/G/Y/R/B/O NT_023132AC0113331833261542D5S21085646.001 AC011333
S/G/Y/R/B/O NT_023132AC0113331833481922WI-40855647.001 AC011333
S/G/Y/R/B/O NT_023132AC0113331833717762D5S20585648.001 AC011333
S/G/Y/R/B/O NT_023132AC0257521834573461      
S/G/Y/R/B/O NT_023132AC0919631834702172      
S/G/Y/R/B/O NT_023132AC0083811835411373AFM161YE115649.001AC091963, AC010257, AC091963
S/G/Y/R/B/O NT_023132AC0083811835679453D5S4985650.001AC025752, AC091963, AC108104, AC008381, AC010257, AC025752, AC091963, AC108104
S/G/Y/R/B/O NT_023132AC1081041836001951      
S/G/Y/R/B/O NT_023132AC0265521836309271      
S/G/Y/R/B/O NT_023132AC0244721836382051      
S/G/Y/R/B/O NT_023132AC1081121836865241      
S/G/Y/R/B/O NT_023132AC1133461838492401      
S/G/Y/R/B/O NT_023132AC0102201840283163      
S/G/Y/R/B/O NT_023132AC0084131840577553      
S/G/Y/R/B/O NT_023132AC0273161841866223      
S/G/Y/R/B/O NT_023132AC0273101842596452WI-48355651.001 AC027310
S/G/Y/R/B/O NT_023132AC0086991842889623WI-64605652.001AC027310, AC008699, AC027310
S/G/Y/R/B/O NT_023132AC0086991843861443WI-74515653.001AC090065, AC008699, AC090065
S/G/Y/R/B/O NT_023132AC0209031844555841      
S/G/Y/R/B/O NT_023132AC0900651844564011