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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010274 | AC116903 | 86506734 | 3 | chr15 | NT_010274 | AC116162 | 86666627 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC116162 | 86666627 | 3 | chr15 | NT_010274 | AC090985 | 86771300 | 3 | 76306 | 0 | 0 | 76306 |
S/G/Y/R/B/O |
NT_010274 | AC116162 | 86666627 | 3 |   |   | AC024071 | 86164577 | | 42741 | 0 | 16109 | 58850 |
S/G/Y/R/B/O |
NT_010274 | AC090985 | 86771300 | 3 | chr15 | NT_010274 | AC091580 | 86880941 | 3 | 28045 | 0 | 0 | 28045 |
S/G/Y/R/B/O |
NT_010274 | AC090985 | 86771300 | 3 |   |   | AC020563 | 86771300 | | 108587 | 0 | 0 | 108587 |
S/G/Y/R/B/O |
NT_010274 | AC090985 | 86771300 | 3 |   |   | AC022372 | 86771300 | | 44756 | 0 | 0 | 44756 |
S/G/Y/R/B/O |
NT_010274 | AC090985 | 86771300 | 3 |   |   | AC024071 | 86771300 | | 93135 | 8953 | 32115 | 134203 |
S/G/Y/R/B/O |
NT_010274 | AC091580 | 86880941 | 3 | chr15 | NT_010274 | AC025824 | 86961263 | 3 | 63132 | 0 | 0 | 63132 |
S/G/Y/R/B/O |
NT_010274 | AC091580 | 86880941 | 3 |   |   | AC012478 | 86666627 | | 13931 | 0 | 0 | 13931 |
S/G/Y/R/B/O |
NT_010274 | AC091580 | 86880941 | 3 |   |   | AC020563 | 86666627 | | 108358 | 0 | 0 | 108358 |
S/G/Y/R/B/O |
NT_010274 | AC091580 | 86880941 | 3 |   |   | AC024071 | 86666627 | | 15493 | 7986 | 0 | 23479 |
S/G/Y/R/B/O |
NT_010274 | AC025824 | 86961263 | 3 | chr15 | NT_010274 | AC091544 | 87007248 | 2 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC025824 | 86961263 | 3 |   |   | AC020563 | 86771300 | | 63227 | 0 | 0 | 63227 |
S/G/Y/R/B/O |
NT_010274 | AC091544 | 87007248 | 2 | chr15 | NT_010274 | AC106028 | 87127561 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC106028 | 87127561 | 3 | chr15 | NT_010274 | AC013394 | 87242731 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC013394 | 87242731 | 3 | chr15 | NT_010274 | AC087641 | 87417564 | 3 | 127279 | 0 | 0 | 127279 |
S/G/Y/R/B/O |
NT_010274 | AC013394 | 87242731 | 3 |   |   | AC074383 | 86880941 | | 127016 | 0 | 0 | 127016 |
S/G/Y/R/B/O |
NT_010274 | AC087641 | 87417564 | 3 | chr15 | NT_010274 | AC108457 | 87468350 | 3 | 50741 | 0 | 0 | 50741 |
S/G/Y/R/B/O |
NT_010274 | AC087641 | 87417564 | 3 |   |   | AC011129 | 87417564 | | 50736 | 0 | 0 | 50736 |
S/G/Y/R/B/O |
NT_010274 | AC087641 | 87417564 | 3 |   |   | AC074383 | 87242731 | | 173887 | 2786 | 0 | 176673 |
S/G/Y/R/B/O |
NT_010274 | AC108457 | 87468350 | 3 | chr15 | NT_010274 | AC112693 | 87542712 | 3 | 35589 | 0 | 0 | 35589 |
S/G/Y/R/B/O |
NT_010274 | AC108457 | 87468350 | 3 |   |   | AC011129 | 87468350 | | 130332 | 0 | 28431 | 158763 |
S/G/Y/R/B/O |
NT_010274 | AC108457 | 87468350 | 3 |   |   | AC074383 | 87468350 | | 36599 | 2769 | 10274 | 49642 |
S/G/Y/R/B/O |
NT_010274 | AC112693 | 87542712 | 3 | chr15 | NT_010274 | AC023114 | 87581825 | 3 | 96841 | 0 | 0 | 96841 |
S/G/Y/R/B/O |
NT_010274 | AC112693 | 87542712 | 3 |   |   | AC011129 | 87542712 | | 10049 | 1256 | 44194 | 55499 |
S/G/Y/R/B/O |
NT_010274 | AC112693 | 87542712 | 3 |   |   | AC090606 | 87581825 | | 91295 | 2095 | 0 | 93390 |
S/G/Y/R/B/O |
NT_010274 | AC023114 | 87581825 | 3 | chr15 | NT_010274 | AC091078 | 87746067 | 3 | 0 | 2470 | 0 | 2470 |
S/G/Y/R/B/O |
NT_010274 | AC023114 | 87581825 | 3 |   |   | AC011129 | 87468350 | | 14683 | 0 | 2031 | 16714 |
S/G/Y/R/B/O |
NT_010274 | AC023114 | 87581825 | 3 |   |   | AC090606 | 63585270 | | 113873 | 1927 | 0 | 115800 |
S/G/Y/R/B/O |
NT_010274 | AC091078 | 87746067 | 3 | chr15 | NT_010274 | AC110023 | 87926310 | 3 | 24088 | 0 | 0 | 24088 |
S/G/Y/R/B/O |
NT_010274 | AC091078 | 87746067 | 3 |   |   | AC024262 | 87581825 | | 126636 | 0 | 55114 | 181750 |
S/G/Y/R/B/O |
NT_010274 | AC110023 | 87926310 | 3 | chr15 | NT_010274 | AC090762 | 88069196 | 3 | 137060 | 0 | 0 | 137060 |
S/G/Y/R/B/O |
NT_010274 | AC110023 | 87926310 | 3 | chr15 | NT_010274 | AC107979 | 88124601 | 3 | 31027 | 0 | 0 | 31027 |
S/G/Y/R/B/O |
NT_010274 | AC110023 | 87926310 | 3 |   |   | AC024262 | 87926310 | | 24089 | 0 | 0 | 24089 |
S/G/Y/R/B/O |
NT_010274 | AC090762 | 88069196 | 3 | chr15 | NT_010274 | AC107979 | 88124601 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC107979 | 88124601 | 3 | chr15 | NT_010274 | AC103996 | 88186512 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010274 | AC107979 | 88124601 | 3 | chr15 | NT_010274 | AC110023 | 87926310 | 3 | 31027 | 0 | 0 | 31027 |
S/G/Y/R/B/O |
NT_010274 | AC107979 | 88124601 | 3 |   |   | AL365198 | 87926310 | | 25667 | 0 | 0 | 25667 |
S/G/Y/R/B/O |
NT_010274 | AC103996 | 88186512 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010274 | AC103996 | 88186512 | 3 |   |   | AC104390 | 87926310 | | 66931 | 0 | 0 | 66931 |
S/G/Y/R/B/O |
NT_010274 | AC103996 | 88186512 | 3 |   |   | AL365198 | 87926310 | | 72872 | 0 | 0 | 72872 |
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