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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_033278 | AC126332 | 21286025 | 2 | chr15 | NT_033278 | AC091304 | 21415871 | 3 | 17680 | 0 | 5295 | 22975 |
S/G/Y/R/B/O |
NT_033278 | AC126332 | 21286025 | 2 |   |   | AC004583 | 21077559 | | 104072 | 0 | 5288 | 109360 |
S/G/Y/R/B/O |
NT_033278 | AC126332 | 21286025 | 2 |   |   | AC004583 | 21077559 | | 104072 | 0 | 5288 | 109360 |
S/G/Y/R/B/O |
NT_033278 | AC126332 | 21286025 | 2 |   |   | AC018348 | 21077559 | | 17654 | 1784 | 3437 | 22875 |
S/G/Y/R/B/O |
NT_033278 | AC126332 | 21286025 | 2 |   |   | AC018348 | 21077559 | | 17654 | 1784 | 3437 | 22875 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 | chr15 | NT_033278 | AC124271 | 21595089 | 2 | 36743 | 0 | 16685 | 53428 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 | chr15 | NT_035354 | AC090411 | 15563811 | 1 | 32980 | 0 | 2199 | 35179 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 | chr15 | NT_033278 | AC121562 | 21617912 | 2 | 26178 | 2641 | 83372 | 112191 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 28818 | 2063 | 48324 | 79205 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC004583 | 21415871 | | 45972 | 0 | 0 | 45972 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC011100 | 21415871 | | 24847 | 4915 | 18259 | 48021 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC018348 | 16368142 | | 68548 | 0 | 112616 | 181164 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC100760 | 15563811 | | 145915 | 2278 | 0 | 148193 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC121153 | 15563811 | | 19937 | 0 | 49246 | 69183 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC131256 | 16057084 | | 21108 | 2163 | 50195 | 73466 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC131290 | 16057084 | | 134083 | 0 | 10595 | 144678 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC131290 | 16057084 | | 134083 | 0 | 10595 | 144678 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC131291 | 16057084 | | 62082 | 0 | 26199 | 88281 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC131291 | 16057084 | | 62082 | 0 | 26199 | 88281 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC132916 | 16057084 | | 97135 | 1554 | 11938 | 110627 |
S/G/Y/R/B/O |
NT_033278 | AC091304 | 21415871 | 3 |   |   | AC132916 | 16057084 | | 97135 | 1554 | 11938 | 110627 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 | chr15 | NT_033278 | AC121562 | 21617912 | 2 | 12635 | 3812 | 70523 | 86970 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 | chr15 | NT_010346 | AC116165 | 16295676 | 2 | 28218 | 0 | 20431 | 48649 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 | chr15 | NT_010346 | AC116165 | 16295676 | 2 | 28218 | 0 | 20431 | 48649 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 10610 | 0 | 80856 | 91466 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 10610 | 0 | 80856 | 91466 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC011100 | 30819347 | | 27176 | 9190 | 9025 | 45391 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC011100 | 30819347 | | 27176 | 9190 | 9025 | 45391 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC018348 | 30819347 | | 13627 | 0 | 30204 | 43831 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC018348 | 30819347 | | 13627 | 0 | 30204 | 43831 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC100760 | 21415871 | | 51981 | 4516 | 3702 | 60199 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC100760 | 21415871 | | 51981 | 4516 | 3702 | 60199 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131256 | 16057084 | | 15619 | 2174 | 65531 | 83324 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131256 | 16057084 | | 15619 | 2174 | 65531 | 83324 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131290 | 16057084 | | 49719 | 0 | 33371 | 83090 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131290 | 16057084 | | 49719 | 0 | 33371 | 83090 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131290 | 16057084 | | 49719 | 0 | 33371 | 83090 |
S/G/Y/R/B/O |
NT_033278 | AC124271 | 21595089 | 2 |   |   | AC131290 | 16057084 | | 49719 | 0 | 33371 | 83090 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_033278 | AC135069 | 21745354 | 1 | 35536 | 0 | 0 | 35536 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_010346 | AC016033 | 16368142 | 1 | 45889 | 0 | 21191 | 67080 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_035354 | AC025138 | 15641818 | 3 | 22390 | 0 | 0 | 22390 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_033278 | AC091304 | 21415871 | 3 | 26178 | 2641 | 83372 | 112191 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_010346 | AC116165 | 16295676 | 2 | 141877 | 5527 | 13069 | 160473 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_010346 | AC116166 | 16170810 | 3 | 83371 | 0 | 0 | 83371 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_010346 | AC127031 | 16365575 | 2 | 27911 | 974 | 104 | 28989 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 134990 | 16233 | 41247 | 192470 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC011100 | 16057084 | | 10202 | 3372 | 41105 | 54679 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC018348 | 16368142 | | 23000 | 2641 | 88241 | 113882 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC121153 | 16170810 | | 88120 | 7457 | 39286 | 134863 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC121323 | 16170810 | | 75234 | 5525 | 86899 | 167658 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC131291 | 16057084 | | 81894 | 6616 | 61375 | 149885 |
S/G/Y/R/B/O |
NT_033278 | AC121562 | 21617912 | 2 |   |   | AC131291 | 16057084 | | 81894 | 6616 | 61375 | 149885 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC090764 | 16021324 | 1 | 69653 | 0 | 16976 | 86629 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC090764 | 16021324 | 1 | 69653 | 0 | 16976 | 86629 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC090764 | 16021324 | 1 | 69653 | 0 | 16976 | 86629 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC090764 | 16021324 | 1 | 69653 | 0 | 16976 | 86629 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC116165 | 16295676 | 2 | 74047 | 0 | 10406 | 84453 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC116165 | 16295676 | 2 | 74047 | 0 | 10406 | 84453 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC116166 | 16170810 | 3 | 36630 | 0 | 14916 | 51546 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC116166 | 16170810 | 3 | 36630 | 0 | 14916 | 51546 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 61152 | 0 | 0 | 61152 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 | chr15 | NT_010346 | AC129914 | 16057084 | 2 | 61152 | 0 | 0 | 61152 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC016446 | 853487 | | 67638 | 0 | 37339 | 104977 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC016446 | 853487 | | 67638 | 0 | 37339 | 104977 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC121323 | 16170810 | | 28361 | 0 | 0 | 28361 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC121323 | 16170810 | | 28361 | 0 | 0 | 28361 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC135177 | 16057084 | | 131552 | 0 | 27318 | 158870 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC135177 | 16057084 | | 131552 | 0 | 27318 | 158870 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC135177 | 16057084 | | 131552 | 0 | 27318 | 158870 |
S/G/Y/R/B/O |
NT_033278 | AC135069 | 21745354 | 1 |   |   | AC135177 | 16057084 | | 131552 | 0 | 27318 | 158870 |
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