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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037852 | AC106029 | 13533547 | 3 | chr15 | NT_037852 | AC126603 | 13714138 | 1 | 0 | 0 | 27521 | 27521 |
S/G/Y/R/B/O |
NT_037852 | AC106029 | 13533547 | 3 |   |   | AC084192 | 14384474 | | 17175 | 9605 | 15336 | 42116 |
S/G/Y/R/B/O |
NT_037852 | AC106029 | 13533547 | 3 |   |   | AC134678 | 13448512 | | 40992 | 0 | 14826 | 55818 |
S/G/Y/R/B/O |
NT_037852 | AC106029 | 13533547 | 3 |   |   | AC134678 | 13448512 | | 40992 | 0 | 14826 | 55818 |
S/G/Y/R/B/O |
NT_037852 | AC106029 | 13533547 | 3 |   |   | AC136438 | 13448512 | | 16231 | 0 | 0 | 16231 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 | chr15 | NT_037852 | AC087386 | 13844269 | 3 | 9432 | 1607 | 0 | 11039 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 | chr15 | NT_033275 | AC018963 | 14384474 | 1 | 112871 | 2039 | 18578 | 133488 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 | chr15 | NT_033275 | AC026495 | 14629954 | 3 | 18579 | 0 | 0 | 18579 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 47991 | 0 | 0 | 47991 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 47991 | 0 | 0 | 47991 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 |   |   | AC084192 | 14629954 | | 48542 | 7192 | 8697 | 64431 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 |   |   | AC134678 | 13448512 | | 40969 | 0 | 25660 | 66629 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 |   |   | AC134678 | 13448512 | | 40969 | 0 | 25660 | 66629 |
S/G/Y/R/B/O |
NT_037852 | AC126603 | 13714138 | 1 |   |   | AC136438 | 13448512 | | 49873 | 0 | 57176 | 107049 |
S/G/Y/R/B/O |
NT_037852 | AC087386 | 13844269 | 3 | chr15 | NT_037852 | AC037471 | 13999612 | 3 | 60638 | 0 | 0 | 60638 |
S/G/Y/R/B/O |
NT_037852 | AC087386 | 13844269 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 128528 | 0 | 0 | 128528 |
S/G/Y/R/B/O |
NT_037852 | AC087386 | 13844269 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 128528 | 0 | 0 | 128528 |
S/G/Y/R/B/O |
NT_037852 | AC087386 | 13844269 | 3 | chr15 | NT_033275 | AC127381 | 15007234 | 3 | 69154 | 0 | 0 | 69154 |
S/G/Y/R/B/O |
NT_037852 | AC087386 | 13844269 | 3 |   |   | AC084192 | 13999612 | | 21403 | 11654 | 9988 | 43045 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 | chr15 | NT_037852 | AC060814 | 14078206 | 3 | 77579 | 0 | 0 | 77579 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 49354 | 0 | 0 | 49354 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 49354 | 0 | 0 | 49354 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 49354 | 0 | 0 | 49354 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 | chr15 | NT_033275 | AC126335 | 14396396 | 1 | 49354 | 0 | 0 | 49354 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 |   |   | AC012414 | 15007234 | | 40472 | 0 | 0 | 40472 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 |   |   | AC012414 | 15007234 | | 40472 | 0 | 0 | 40472 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 |   |   | AC116905 | 13844269 | | 54065 | 0 | 0 | 54065 |
S/G/Y/R/B/O |
NT_037852 | AC037471 | 13999612 | 3 |   |   | AC116905 | 13844269 | | 54065 | 0 | 0 | 54065 |
S/G/Y/R/B/O |
NT_037852 | AC060814 | 14078206 | 3 | chr15 | NT_037852 | AC068446 | 14250499 | 3 | 74490 | 0 | 0 | 74490 |
S/G/Y/R/B/O |
NT_037852 | AC060814 | 14078206 | 3 | chr15 | NT_010362 | AC020679 | 13000001 | 3 | 73683 | 0 | 0 | 73683 |
S/G/Y/R/B/O |
NT_037852 | AC060814 | 14078206 | 3 |   |   | AC012414 | 14396396 | | 134153 | 0 | 0 | 134153 |
S/G/Y/R/B/O |
NT_037852 | AC060814 | 14078206 | 3 |   |   | AC023191 | 13000001 | | 72104 | 0 | 4554 | 76658 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC012414 | 14250499 | | 96935 | 0 | 0 | 96935 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC131280 | 129477309 | | 11938 | 0 | 0 | 11938 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC131280 | 129477309 | | 11938 | 0 | 0 | 11938 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC134393 | 129477309 | | 12528 | 0 | 0 | 12528 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC134393 | 129477309 | | 12528 | 0 | 0 | 12528 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC134676 | 129477309 | | 12414 | 0 | 0 | 12414 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC134676 | 129477309 | | 12414 | 0 | 0 | 12414 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC135058 | 129477309 | | 12476 | 0 | 0 | 12476 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AC135058 | 129477309 | | 12476 | 0 | 0 | 12476 |
S/G/Y/R/B/O |
NT_037852 | AC068446 | 14250499 | 3 |   |   | AF467807 | 129477309 | | 54492 | 0 | 0 | 54492 |
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