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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010280 | AC107457 | 20488955 | 3 | chr15 | NT_010280 | AC104002 | 20529633 | 3 | 13424 | 0 | 0 | 13424 |
S/G/Y/R/B/O |
NT_010280 | AC104002 | 20529633 | 3 | chr15 | NT_010280 | AC021979 | 20686031 | 3 | 63969 | 0 | 0 | 63969 |
S/G/Y/R/B/O |
NT_010280 | AC104002 | 20529633 | 3 |   |   | AC010837 | 20529633 | | 51919 | 0 | 0 | 51919 |
S/G/Y/R/B/O |
NT_010280 | AC104002 | 20529633 | 3 |   |   | AC013388 | 20529633 | | 36475 | 4023 | 0 | 40498 |
S/G/Y/R/B/O |
NT_010280 | AC021979 | 20686031 | 3 | chr15 | NT_010280 | AC090696 | 20812754 | 3 | 21785 | 0 | 0 | 21785 |
S/G/Y/R/B/O |
NT_010280 | AC021979 | 20686031 | 3 |   |   | AC010837 | 20488955 | | 178192 | 0 | 0 | 178192 |
S/G/Y/R/B/O |
NT_010280 | AC021979 | 20686031 | 3 |   |   | AC013388 | 20488955 | | 166901 | 0 | 0 | 166901 |
S/G/Y/R/B/O |
NT_010280 | AC021979 | 20686031 | 3 |   |   | AC026087 | 20488955 | | 19268 | 1570 | 0 | 20838 |
S/G/Y/R/B/O |
NT_010280 | AC090696 | 20812754 | 3 | chr15 | NT_010280 | AC079090 | 20978318 | 3 | 59268 | 0 | 0 | 59268 |
S/G/Y/R/B/O |
NT_010280 | AC090696 | 20812754 | 3 |   |   | AC010837 | 20529633 | | 53000 | 0 | 0 | 53000 |
S/G/Y/R/B/O |
NT_010280 | AC090696 | 20812754 | 3 |   |   | AC013388 | 20529633 | | 23540 | 2443 | 0 | 25983 |
S/G/Y/R/B/O |
NT_010280 | AC090696 | 20812754 | 3 |   |   | AC026087 | 20686031 | | 66204 | 15558 | 42717 | 124479 |
S/G/Y/R/B/O |
NT_010280 | AC090696 | 20812754 | 3 |   |   | AC121324 | 20978318 | | 15377 | 0 | 0 | 15377 |
S/G/Y/R/B/O |
NT_010280 | AC079090 | 20978318 | 3 | chr15 | NT_010280 | AC124091 | 21077559 | 2 | 70510 | 0 | 0 | 70510 |
S/G/Y/R/B/O |
NT_010280 | AC079090 | 20978318 | 3 |   |   | AC017046 | 20978318 | | 18217 | 0 | 13967 | 32184 |
S/G/Y/R/B/O |
NT_010280 | AC079090 | 20978318 | 3 |   |   | AC026087 | 20978318 | | 31355 | 2025 | 21667 | 55047 |
S/G/Y/R/B/O |
NT_010280 | AC079090 | 20978318 | 3 |   |   | AC121324 | 20812754 | | 114618 | 0 | 0 | 114618 |
S/G/Y/R/B/O |
NT_010280 | AC124091 | 21077559 | 2 | chr15 | NT_010280 | AC124090 | 21183597 | 1 | 67670 | 0 | 0 | 67670 |
S/G/Y/R/B/O |
NT_010280 | AC124091 | 21077559 | 2 |   |   | AC017046 | 21077559 | | 65848 | 0 | 29823 | 95671 |
S/G/Y/R/B/O |
NT_010280 | AC124091 | 21077559 | 2 |   |   | AC121324 | 20978318 | | 147883 | 0 | 0 | 147883 |
S/G/Y/R/B/O |
NT_010280 | AC124091 | 21077559 | 2 |   |   | AC124089 | 20978318 | | 34235 | 5340 | 19380 | 58955 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC017046 | 21183597 | | 42258 | 0 | 15293 | 57551 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC017046 | 21183597 | | 42258 | 0 | 15293 | 57551 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC121324 | 21183597 | | 67241 | 0 | 0 | 67241 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC121324 | 21183597 | | 67241 | 0 | 0 | 67241 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC124089 | 21183597 | | 58376 | 6909 | 19435 | 84720 |
S/G/Y/R/B/O |
NT_010280 | AC124090 | 21183597 | 1 |   |   | AC124089 | 21183597 | | 58376 | 6909 | 19435 | 84720 |
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