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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 | chr15 | NT_024683 | AC131310 | 20081865 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 | chr15 | NT_024683 | AC103745 | 20251348 | 3 | 13572 | 0 | 0 | 13572 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 | chr15 | NT_024683 | AC127511 | 20251323 | 1 | 44606 | 0 | 0 | 44606 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 | chr15 | NT_024683 | AC127511 | 20251323 | 1 | 44606 | 0 | 0 | 44606 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 |   |   | AC124261 | 20251348 | | 72600 | 0 | 472 | 73072 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 |   |   | AC124262 | 20251348 | | 43315 | 0 | 70205 | 113520 |
S/G/Y/R/B/O |
NT_024683 | AC131312 | 20021760 | 1 |   |   | AC130300 | 20251323 | | 26572 | 0 | 0 | 26572 |
S/G/Y/R/B/O |
NT_024683 | AC131310 | 20081865 | 3 | chr15 | NT_024683 | AC127511 | 20251323 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024683 | AC131310 | 20081865 | 3 |   |   | AC011224 | 20251323 | | 145350 | 0 | 0 | 145350 |
S/G/Y/R/B/O |
NT_024683 | AC131310 | 20081865 | 3 |   |   | AC130300 | 20251323 | | 26534 | 0 | 96099 | 122633 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 | chr15 | NT_024683 | AC103745 | 20251348 | 3 | 44846 | 0 | 0 | 44846 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 | chr15 | NT_024683 | AC131312 | 20021760 | 1 | 44606 | 0 | 0 | 44606 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 | chr15 | NT_024683 | AC131312 | 20021760 | 1 | 44606 | 0 | 0 | 44606 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC011224 | 20251323 | | 164691 | 0 | 0 | 164691 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC011224 | 20251323 | | 164691 | 0 | 0 | 164691 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC124261 | 20251348 | | 13343 | 0 | 75564 | 88907 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC124261 | 20251348 | | 13343 | 0 | 75564 | 88907 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC124262 | 20251348 | | 43673 | 0 | 70031 | 113704 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC124262 | 20251348 | | 43673 | 0 | 70031 | 113704 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC130300 | 20251348 | | 26605 | 0 | 0 | 26605 |
S/G/Y/R/B/O |
NT_024683 | AC127511 | 20251323 | 1 |   |   | AC130300 | 20251348 | | 26605 | 0 | 0 | 26605 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 | chr15 | NT_024683 | AC087485 | 20333990 | 3 | 0 | 0 | 24525 | 24525 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 | chr15 | NT_024683 | AC131312 | 20021760 | 1 | 13572 | 0 | 0 | 13572 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 |   |   | AC006602 | 20021760 | | 42739 | 0 | 0 | 42739 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 |   |   | AC011224 | 20021760 | | 18195 | 0 | 0 | 18195 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 |   |   | AC124261 | 20333990 | | 13258 | 0 | 0 | 13258 |
S/G/Y/R/B/O |
NT_024683 | AC103745 | 20251348 | 3 |   |   | AC124262 | 20333990 | | 43539 | 0 | 0 | 43539 |
S/G/Y/R/B/O |
NT_024683 | AC087485 | 20333990 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_024683 | AC087485 | 20333990 | 3 |   |   | AC019229 | 20021760 | | 68761 | 2619 | 53820 | 125200 |
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