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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 | chr15 | NT_010362 | AC010760 | 13142282 | 3 | 10750 | 0 | 0 | 10750 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 | chr15 | NT_037852 | AC060814 | 14078206 | 3 | 73683 | 0 | 0 | 73683 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 |   |   | AC012414 | 13142282 | | 36224 | 0 | 0 | 36224 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 |   |   | AC116905 | 14078206 | | 50151 | 0 | 0 | 50151 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 |   |   | AC135068 | 14078206 | | 12700 | 0 | 0 | 12700 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 |   |   | AC135068 | 14078206 | | 12700 | 0 | 0 | 12700 |
S/G/Y/R/B/O |
NT_010362 | AC020679 | 13000001 | 3 |   |   | AL445443 | 14078206 | | 38462 | 0 | 0 | 38462 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 | chr15 | NT_010362 | AC025884 | 13321421 | 2 | 38136 | 0 | 0 | 38136 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AC060768 | 13321421 | | 18224 | 0 | 0 | 18224 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AC134981 | 13321421 | | 18206 | 0 | 0 | 18206 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AC134981 | 13321421 | | 18206 | 0 | 0 | 18206 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AC135068 | 13321421 | | 171047 | 0 | 0 | 171047 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AC135068 | 13321421 | | 171047 | 0 | 0 | 171047 |
S/G/Y/R/B/O |
NT_010362 | AC010760 | 13142282 | 3 |   |   | AL445443 | 13321421 | | 42342 | 0 | 10774 | 53116 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 | chr15 | NT_010362 | AC130376 | 13448512 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 |   |   | AC060768 | 13142282 | | 95509 | 2467 | 0 | 97976 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 |   |   | AC134981 | 13142282 | | 72036 | 2426 | 2905 | 77367 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 |   |   | AC134981 | 13142282 | | 72036 | 2426 | 2905 | 77367 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 |   |   | AC135068 | 13142282 | | 42959 | 0 | 0 | 42959 |
S/G/Y/R/B/O |
NT_010362 | AC025884 | 13321421 | 2 |   |   | AC135068 | 13142282 | | 42959 | 0 | 0 | 42959 |
S/G/Y/R/B/O |
NT_010362 | AC130376 | 13448512 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010362 | AC130376 | 13448512 | 1 |   |   | AC084192 | 34966120 | | 13080 | 5232 | 10283 | 28595 |
S/G/Y/R/B/O |
NT_010362 | AC130376 | 13448512 | 1 |   |   | AC134678 | 14540515 | | 30834 | 0 | 3940 | 34774 |
S/G/Y/R/B/O |
NT_010362 | AC130376 | 13448512 | 1 |   |   | AC134678 | 14540515 | | 30834 | 0 | 3940 | 34774 |
S/G/Y/R/B/O |
NT_010362 | AC130376 | 13448512 | 1 |   |   | AC136438 | 14540515 | | 10947 | 0 | 54090 | 65037 |
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