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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010748 | AC008105 | 45388334 | 1 | chr17 | NT_010748 | AC003963 | 45503149 | 3 | 3625 | 0 | 0 | 3625 |
S/G/Y/R/B/O |
NT_010748 | AC008105 | 45388334 | 1 |   |   | AC024047 | 45503149 | | 13264 | 3729 | 34245 | 51238 |
S/G/Y/R/B/O |
NT_010748 | AC008105 | 45388334 | 1 |   |   | AC087298 | 45503149 | | 44702 | 0 | 10056 | 54758 |
S/G/Y/R/B/O |
NT_010748 | AC003963 | 45503149 | 3 | chr17 | NT_010748 | AC003070 | 45551181 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_010748 | AC003963 | 45503149 | 3 |   |   | AC024047 | 45388334 | | 22524 | 7003 | 7603 | 37130 |
S/G/Y/R/B/O |
NT_010748 | AC003070 | 45551181 | 3 | chr17 | NT_010748 | AC091132 | 45679096 | 1 | 48436 | 0 | 0 | 48436 |
S/G/Y/R/B/O |
NT_010748 | AC003070 | 45551181 | 3 | chr17 | NT_010748 | AC069007 | 46624478 | 1 | 18311 | 4289 | 29371 | 51971 |
S/G/Y/R/B/O |
NT_010748 | AC091132 | 45679096 | 1 | chr17 | NT_010748 | AC048388 | 45757887 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010748 | AC091132 | 45679096 | 1 | chr17 | NT_010748 | AC069007 | 46624478 | 1 | 86118 | 1629 | 52609 | 140356 |
S/G/Y/R/B/O |
NT_010748 | AC091132 | 45679096 | 1 | chr17 | NT_010748 | AC126544 | 45878627 | 3 | 18609 | 0 | 0 | 18609 |
S/G/Y/R/B/O |
NT_010748 | AC091132 | 45679096 | 1 |   |   | AC073426 | 46624478 | | 16098 | 1395 | 0 | 17493 |
S/G/Y/R/B/O |
NT_010748 | AC091132 | 45679096 | 1 |   |   | AC126546 | 45878627 | | 12081 | 2915 | 1084 | 16080 |
S/G/Y/R/B/O |
NT_010748 | AC048388 | 45757887 | 1 | chr17 | NT_010748 | AC126544 | 45878627 | 3 | 0 | 0 | 43608 | 43608 |
S/G/Y/R/B/O |
NT_010748 | AC048388 | 45757887 | 1 |   |   | AC073426 | 46456348 | | 11098 | 1830 | 37985 | 50913 |
S/G/Y/R/B/O |
NT_010748 | AC048388 | 45757887 | 1 |   |   | AC073990 | 46456348 | | 12068 | 0 | 30431 | 42499 |
S/G/Y/R/B/O |
NT_010748 | AC126544 | 45878627 | 3 | chr17 | NT_010748 | AC106030 | 46020833 | 3 | 30651 | 0 | 0 | 30651 |
S/G/Y/R/B/O |
NT_010748 | AC126544 | 45878627 | 3 | chr17 | NT_010748 | AC069007 | 46624478 | 1 | 12225 | 0 | 0 | 12225 |
S/G/Y/R/B/O |
NT_010748 | AC126544 | 45878627 | 3 | chr17 | NT_010748 | AC091132 | 45679096 | 1 | 18609 | 0 | 0 | 18609 |
S/G/Y/R/B/O |
NT_010748 | AC126544 | 45878627 | 3 |   |   | AC073426 | 46624478 | | 99232 | 3536 | 23340 | 126108 |
S/G/Y/R/B/O |
NT_010748 | AC126544 | 45878627 | 3 |   |   | AC126546 | 46020833 | | 125285 | 1796 | 7776 | 134857 |
S/G/Y/R/B/O |
NT_010748 | AC106030 | 46020833 | 3 | chr17 | NT_010748 | AC003662 | 46131953 | 3 | 9887 | 0 | 0 | 9887 |
S/G/Y/R/B/O |
NT_010748 | AC106030 | 46020833 | 3 |   |   | AC004703 | 46131953 | | 12585 | 0 | 0 | 12585 |
S/G/Y/R/B/O |
NT_010748 | AC106030 | 46020833 | 3 |   |   | AC036218 | 46131953 | | 14026 | 1716 | 0 | 15742 |
S/G/Y/R/B/O |
NT_010748 | AC106030 | 46020833 | 3 |   |   | AC073426 | 46131953 | | 23775 | 1543 | 15127 | 40445 |
S/G/Y/R/B/O |
NT_010748 | AC106030 | 46020833 | 3 |   |   | AC126546 | 45878627 | | 59124 | 0 | 0 | 59124 |
S/G/Y/R/B/O |
NT_010748 | AC003662 | 46131953 | 3 | chr17 | NT_010748 | AC010792 | 46216644 | 3 | 0 | 0 | 1609 | 1609 |
S/G/Y/R/B/O |
NT_010748 | AC003662 | 46131953 | 3 |   |   | AC036218 | 46216644 | | 63778 | 4691 | 1245 | 69714 |
S/G/Y/R/B/O |
NT_010748 | AC010792 | 46216644 | 3 | chr17 | NT_010748 | AC004139 | 46332050 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010748 | AC010792 | 46216644 | 3 |   |   | AC036218 | 46131953 | | 55497 | 6705 | 4406 | 66608 |
S/G/Y/R/B/O |
NT_010748 | AC010792 | 46216644 | 3 |   |   | AC091628 | 46131953 | | 117298 | 0 | 0 | 117298 |
S/G/Y/R/B/O |
NT_010748 | AC004139 | 46332050 | 3 | chr17 | NT_010748 | AC005829 | 46456348 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_010748 | AC005829 | 46456348 | 3 | chr17 | NT_010748 | AC069007 | 46624478 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010748 | AC005829 | 46456348 | 3 |   |   | AC073990 | 45757887 | | 55062 | 0 | 54007 | 109069 |
S/G/Y/R/B/O |
NT_010748 | AC005829 | 46456348 | 3 |   |   | AC090419 | 45757887 | | 128124 | 0 | 0 | 128124 |
S/G/Y/R/B/O |
NT_010748 | AC005829 | 46456348 | 3 |   |   | AC126604 | 45757887 | | 86672 | 0 | 6541 | 93213 |
S/G/Y/R/B/O |
NT_010748 | AC005829 | 46456348 | 3 |   |   | AC126604 | 45757887 | | 86672 | 0 | 6541 | 93213 |
S/G/Y/R/B/O |
NT_010748 | AC069007 | 46624478 | 1 | chr17 | NT_010748 | AC127032 | 46657960 | 3 | 8567 | 0 | 4800 | 13367 |
S/G/Y/R/B/O |
NT_010748 | AC069007 | 46624478 | 1 | chr17 | NT_010748 | AC003070 | 45551181 | 3 | 18311 | 4289 | 29371 | 51971 |
S/G/Y/R/B/O |
NT_010748 | AC069007 | 46624478 | 1 | chr17 | NT_010704 | AC037487 | 68493044 | 3 | 24966 | 0 | 0 | 24966 |
S/G/Y/R/B/O |
NT_010748 | AC069007 | 46624478 | 1 | chr17 | NT_010748 | AC091132 | 45679096 | 1 | 86118 | 1629 | 52609 | 140356 |
S/G/Y/R/B/O |
NT_010748 | AC069007 | 46624478 | 1 | chr17 | NT_010748 | AC126544 | 45878627 | 3 | 12225 | 0 | 0 | 12225 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC073990 | 46624478 | | 150291 | 0 | 8026 | 158317 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC073990 | 46624478 | | 150291 | 0 | 8026 | 158317 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC126604 | 45679096 | | 129513 | 0 | 12961 | 142474 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC126604 | 45679096 | | 129513 | 0 | 12961 | 142474 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC126604 | 45679096 | | 129513 | 0 | 12961 | 142474 |
S/G/Y/R/B/O |
NT_010748 | AC127032 | 46657960 | 3 |   |   | AC126604 | 45679096 | | 129513 | 0 | 12961 | 142474 |
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