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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_035427 | AC079005 | 61299229 | 3 | chr17 | NT_035427 | AC015876 | 61426845 | 3 | 41194 | 0 | 0 | 41194 |
S/G/Y/R/B/O |
NT_035427 | AC079005 | 61299229 | 3 |   |   | AC079202 | 61426845 | | 23882 | 25663 | 18696 | 68241 |
S/G/Y/R/B/O |
NT_035427 | AC015876 | 61426845 | 3 | chr17 | NT_035427 | AC005884 | 61547913 | 3 | 2288 | 0 | 0 | 2288 |
S/G/Y/R/B/O |
NT_035427 | AC005884 | 61547913 | 3 | chr17 | NT_035427 | AC005856 | 61665812 | 3 | 0 | 1996 | 0 | 1996 |
S/G/Y/R/B/O |
NT_035427 | AC005856 | 61665812 | 3 | chr17 | NT_035427 | AC005746 | 61790723 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035427 | AC005856 | 61665812 | 3 |   |   | AC079622 | 61547913 | | 11530 | 5290 | 7712 | 24532 |
S/G/Y/R/B/O |
NT_035427 | AC005746 | 61790723 | 3 | chr17 | NT_035427 | AC005901 | 61978079 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035427 | AC005746 | 61790723 | 3 |   |   | AC079622 | 61978079 | | 43095 | 2210 | 29714 | 75019 |
S/G/Y/R/B/O |
NT_035427 | AC005901 | 61978079 | 3 | chr17 | NT_035427 | AC002994 | 62132842 | 3 | 0 | 1995 | 0 | 1995 |
S/G/Y/R/B/O |
NT_035427 | AC002994 | 62132842 | 3 | chr17 | NT_035427 | AC005969 | 62274654 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035427 | AC005969 | 62274654 | 3 | chr17 | NT_035427 | AC060798 | 62419898 | 3 | 42321 | 0 | 0 | 42321 |
S/G/Y/R/B/O |
NT_035427 | AC060798 | 62419898 | 3 | chr17 | NT_035427 | AC018628 | 62549532 | 3 | 49185 | 0 | 0 | 49185 |
S/G/Y/R/B/O |
NT_035427 | AC018628 | 62549532 | 3 | chr17 | NT_035427 | AC008158 | 62604366 | 3 | 24046 | 0 | 0 | 24046 |
S/G/Y/R/B/O |
NT_035427 | AC008158 | 62604366 | 3 | chr17 | NT_035427 | AC124802 | 62728403 | 2 | 56999 | 0 | 9298 | 66297 |
S/G/Y/R/B/O |
NT_035427 | AC008158 | 62604366 | 3 |   |   | AC129927 | 62728403 | | 62835 | 3452 | 0 | 66287 |
S/G/Y/R/B/O |
NT_035427 | AC124802 | 62728403 | 2 | chr17 | NT_035427 | AC053481 | 62781340 | 3 | 8573 | 0 | 0 | 8573 |
S/G/Y/R/B/O |
NT_035427 | AC124802 | 62728403 | 2 |   |   | AC015885 | 62604366 | | 15695 | 2038 | 7310 | 25043 |
S/G/Y/R/B/O |
NT_035427 | AC124802 | 62728403 | 2 |   |   | AC015885 | 62604366 | | 15695 | 2038 | 7310 | 25043 |
S/G/Y/R/B/O |
NT_035427 | AC124802 | 62728403 | 2 |   |   | AC129927 | 36672822 | | 99807 | 3490 | 0 | 103297 |
S/G/Y/R/B/O |
NT_035427 | AC124802 | 62728403 | 2 |   |   | AC129927 | 36672822 | | 99807 | 3490 | 0 | 103297 |
S/G/Y/R/B/O |
NT_035427 | AC053481 | 62781340 | 3 | chr17 | NT_035427 | AC008026 | 62957575 | 3 | 60895 | 0 | 0 | 60895 |
S/G/Y/R/B/O |
NT_035427 | AC053481 | 62781340 | 3 |   |   | AC015885 | 62957575 | | 55510 | 8122 | 30713 | 94345 |
S/G/Y/R/B/O |
NT_035427 | AC053481 | 62781340 | 3 |   |   | AC129927 | 19827266 | | 86184 | 0 | 0 | 86184 |
S/G/Y/R/B/O |
NT_035427 | AC008026 | 62957575 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_035427 | AC008026 | 62957575 | 3 |   |   | AC018636 | 19827266 | | 34281 | 0 | 0 | 34281 |
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