|
|
Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
| |
|
|
|
|
Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC127518 | 83807545 | 2 | 44485 | 10921 | 35118 | 90524 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC068584 | 83989706 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC068584 | 83989706 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC068584 | 83989706 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC068584 | 83989706 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC087222 | 84080248 | 2 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC087222 | 84080248 | 2 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC087222 | 84080248 | 2 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 | chr17 | NT_037956 | AC087222 | 84080248 | 2 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 |   |   | AC021215 | 853487 | | 33545 | 9004 | 42228 | 84777 |
S/G/Y/R/B/O |
NT_037956 | AC130371 | 83767444 | 1 |   |   | AC021215 | 853487 | | 33545 | 9004 | 42228 | 84777 |
S/G/Y/R/B/O |
NT_037956 | AC127518 | 83807545 | 2 | chr17 | NT_037956 | AC068584 | 83989706 | 1 | 33539 | 0 | 0 | 33539 |
S/G/Y/R/B/O |
NT_037956 | AC127518 | 83807545 | 2 |   |   | AC021215 | 83807545 | | 47786 | 2433 | 26087 | 76306 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_037956 | AC087222 | 84080248 | 2 | 107683 | 0 | 0 | 107683 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_010663 | AC068014 | 83694091 | 2 | 58934 | 0 | 0 | 58934 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_010663 | AC068014 | 83694091 | 2 | 58934 | 0 | 0 | 58934 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_010663 | AC068014 | 83694091 | 2 | 58934 | 0 | 0 | 58934 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_010663 | AC068014 | 83694091 | 2 | 58934 | 0 | 0 | 58934 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 35773 | 2959 | 409 | 39141 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 |   |   | AC021215 | 83767444 | | 77648 | 2362 | 24202 | 104212 |
S/G/Y/R/B/O |
NT_037956 | AC068584 | 83989706 | 1 |   |   | AC021215 | 83767444 | | 77648 | 2362 | 24202 | 104212 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 | chr17 | NT_037956 | AC130371 | 83767444 | 1 | 58495 | 8148 | 17091 | 83734 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 |   |   | AC021215 | 83767444 | | 115298 | 4804 | 37271 | 157373 |
S/G/Y/R/B/O |
NT_037956 | AC087222 | 84080248 | 2 |   |   | AC021215 | 83767444 | | 115298 | 4804 | 37271 | 157373 |
| |
|
|
|