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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 | chr17 | NT_024901 | AC126392 | 40673808 | 2 | 74262 | 0 | 30933 | 105195 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 | chr17 | NT_024901 | AC018629 | 40676497 | 3 | 78705 | 0 | 0 | 78705 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 | chr17 | NT_024901 | AC018629 | 40676497 | 3 | 78705 | 0 | 0 | 78705 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC015851 | 30957347 | | 144461 | 2642 | 2971 | 150074 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC015851 | 30957347 | | 144461 | 2642 | 2971 | 150074 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC090426 | 40196895 | | 122722 | 0 | 0 | 122722 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC090426 | 40196895 | | 122722 | 0 | 0 | 122722 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC131063 | 40673808 | | 104469 | 0 | 0 | 104469 |
S/G/Y/R/B/O |
NT_024901 | AC080112 | 40581598 | 2 |   |   | AC131063 | 40673808 | | 104469 | 0 | 0 | 104469 |
S/G/Y/R/B/O |
NT_024901 | AC126392 | 40673808 | 2 | chr17 | NT_024901 | AC018629 | 40676497 | 3 | 128290 | 0 | 30564 | 158854 |
S/G/Y/R/B/O |
NT_024901 | AC126392 | 40673808 | 2 |   |   | AC015851 | 40841157 | | 105540 | 4073 | 1320 | 110933 |
S/G/Y/R/B/O |
NT_024901 | AC126392 | 40673808 | 2 |   |   | AC090426 | 40581598 | | 90207 | 0 | 30952 | 121159 |
S/G/Y/R/B/O |
NT_024901 | AC126392 | 40673808 | 2 |   |   | AC131063 | 85020600 | | 178880 | 1867 | 3814 | 184561 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 | chr17 | NT_024901 | AC004585 | 40841157 | 3 | 5441 | 0 | 0 | 5441 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 | chr17 | NT_024901 | AC080112 | 40581598 | 2 | 78705 | 0 | 0 | 78705 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 | chr17 | NT_024901 | AC080112 | 40581598 | 2 | 78705 | 0 | 0 | 78705 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 |   |   | AC015851 | 40841157 | | 79468 | 2669 | 1938 | 84075 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 |   |   | AC090426 | 40581598 | | 94753 | 0 | 0 | 94753 |
S/G/Y/R/B/O |
NT_024901 | AC018629 | 40676497 | 3 |   |   | AC131063 | 40673808 | | 159628 | 0 | 1613 | 161241 |
S/G/Y/R/B/O |
NT_024901 | AC004585 | 40841157 | 3 | chr17 | NT_024901 | AC073508 | 40971083 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024901 | AC073508 | 40971083 | 3 | chr17 | NT_024901 | AC090283 | 41025987 | 3 | 11246 | 0 | 0 | 11246 |
S/G/Y/R/B/O |
NT_024901 | AC073508 | 40971083 | 3 |   |   | AC005919 | 40673808 | | 54624 | 0 | 0 | 54624 |
S/G/Y/R/B/O |
NT_024901 | AC090283 | 41025987 | 3 | chr17 | NT_024901 | AC004231 | 41182867 | 3 | 23753 | 0 | 0 | 23753 |
S/G/Y/R/B/O |
NT_024901 | AC090283 | 41025987 | 3 |   |   | AC005919 | 41182867 | | 112861 | 0 | 0 | 112861 |
S/G/Y/R/B/O |
NT_024901 | AC004231 | 41182867 | 3 | chr17 | NT_024901 | AC007455 | 41296076 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_024901 | AC004231 | 41182867 | 3 |   |   | AC037482 | 41296076 | | 21155 | 0 | 0 | 21155 |
S/G/Y/R/B/O |
NT_024901 | AC007455 | 41296076 | 3 | chr17 | NT_024901 | AC100808 | 41382432 | 1 | 29797 | 0 | 0 | 29797 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 | chr17 | NT_024901 | AC006070 | 41405760 | 3 | 16577 | 0 | 10281 | 26858 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC025904 | 41296076 | | 11996 | 0 | 11163 | 23159 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC025904 | 41296076 | | 11996 | 0 | 11163 | 23159 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC037482 | 41296076 | | 36346 | 0 | 0 | 36346 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC037482 | 41296076 | | 36346 | 0 | 0 | 36346 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC107303 | 41296076 | | 29823 | 0 | 19398 | 49221 |
S/G/Y/R/B/O |
NT_024901 | AC100808 | 41382432 | 1 |   |   | AC107303 | 41296076 | | 29823 | 0 | 19398 | 49221 |
S/G/Y/R/B/O |
NT_024901 | AC006070 | 41405760 | 3 | chr17 | NT_024901 | AC003958 | 41567747 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_024901 | AC006070 | 41405760 | 3 |   |   | AC025904 | 41567747 | | 40169 | 2265 | 21618 | 64052 |
S/G/Y/R/B/O |
NT_024901 | AC006070 | 41405760 | 3 |   |   | AC107303 | 41382432 | | 32606 | 0 | 47942 | 80548 |
S/G/Y/R/B/O |
NT_024901 | AC003958 | 41567747 | 3 |   |   |   |   |   |   |   |   |   |
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