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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024862 | AC087575 | 23099628 | 3 | chr17 | NT_024862 | AC090894 | 23298384 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024862 | AC087575 | 23099628 | 3 |   |   | AC022263 | 22827933 | | 35509 | 0 | 11827 | 47336 |
S/G/Y/R/B/O |
NT_024862 | AC087575 | 23099628 | 3 |   |   | AC053533 | 22827933 | | 16817 | 13467 | 11281 | 41565 |
S/G/Y/R/B/O |
NT_024862 | AC087575 | 23099628 | 3 |   |   | AC133596 | 23973149 | | 27316 | 0 | 42952 | 70268 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 | chr17 | NT_024862 | AC107940 | 23350612 | 2 | 0 | 0 | 57811 | 57811 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 | chr17 | NT_037954 | AC115009 | 23973149 | 2 | 76617 | 2740 | 88505 | 167862 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC022263 | 23973149 | | 12413 | 0 | 11850 | 24263 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC053533 | 23973149 | | 29436 | 26034 | 48118 | 103588 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC068119 | 23973149 | | 33176 | 8402 | 20817 | 62395 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC124274 | 23973149 | | 93555 | 1656 | 76735 | 171946 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC124279 | 23973149 | | 88446 | 0 | 54517 | 142963 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132822 | 23436016 | | 12101 | 0 | 57758 | 69859 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132822 | 23436016 | | 12101 | 0 | 57758 | 69859 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132825 | 23436016 | | 57627 | 0 | 0 | 57627 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132825 | 23436016 | | 57627 | 0 | 0 | 57627 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132924 | 23436016 | | 85737 | 1117 | 52196 | 139050 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC132924 | 23436016 | | 85737 | 1117 | 52196 | 139050 |
S/G/Y/R/B/O |
NT_024862 | AC090894 | 23298384 | 1 |   |   | AC133596 | 23436016 | | 57859 | 2543 | 70496 | 130898 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 | chr17 | NT_024862 | AC131055 | 23436016 | 2 | 103312 | 0 | 0 | 103312 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 | chr17 | NT_037954 | AC115009 | 23973149 | 2 | 78429 | 0 | 0 | 78429 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC053533 | 23436016 | | 18940 | 3444 | 9079 | 31463 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC068619 | 23436016 | | 49820 | 0 | 35217 | 85037 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC091134 | 23298384 | | 88014 | 0 | 0 | 88014 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC124274 | 23973149 | | 57694 | 0 | 0 | 57694 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC124279 | 23973149 | | 35707 | 0 | 0 | 35707 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC131275 | 23436016 | | 13230 | 0 | 0 | 13230 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC132822 | 23436016 | | 35994 | 0 | 0 | 35994 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC132822 | 23436016 | | 35994 | 0 | 0 | 35994 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC132825 | 23436016 | | 106570 | 0 | 1799 | 108369 |
S/G/Y/R/B/O |
NT_024862 | AC107940 | 23350612 | 2 |   |   | AC132825 | 23436016 | | 106570 | 0 | 1799 | 108369 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 | chr17 | NT_024862 | AC126329 | 23590211 | 2 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 | chr17 | NT_037954 | AC115009 | 23973149 | 2 | 26212 | 0 | 0 | 26212 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 | chr17 | NT_037954 | AC115009 | 23973149 | 2 | 26212 | 0 | 0 | 26212 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC068619 | 23436016 | | 64430 | 2214 | 41791 | 108435 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC068619 | 23436016 | | 64430 | 2214 | 41791 | 108435 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC091134 | 23298384 | | 156051 | 0 | 0 | 156051 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC091134 | 23298384 | | 156051 | 0 | 0 | 156051 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131273 | 23973149 | | 61995 | 0 | 0 | 61995 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131273 | 23973149 | | 61995 | 0 | 0 | 61995 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131273 | 23973149 | | 61995 | 0 | 0 | 61995 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131273 | 23973149 | | 61995 | 0 | 0 | 61995 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131274 | 23973149 | | 69429 | 0 | 0 | 69429 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131274 | 23973149 | | 69429 | 0 | 0 | 69429 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131274 | 23973149 | | 69429 | 0 | 0 | 69429 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131274 | 23973149 | | 69429 | 0 | 0 | 69429 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131275 | 23973149 | | 96726 | 0 | 0 | 96726 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC131275 | 23973149 | | 96726 | 0 | 0 | 96726 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132822 | 23973149 | | 69169 | 0 | 0 | 69169 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132822 | 23973149 | | 69169 | 0 | 0 | 69169 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132822 | 23973149 | | 69169 | 0 | 0 | 69169 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132822 | 23973149 | | 69169 | 0 | 0 | 69169 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132825 | 23973149 | | 56379 | 0 | 0 | 56379 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132825 | 23973149 | | 56379 | 0 | 0 | 56379 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132825 | 23973149 | | 56379 | 0 | 0 | 56379 |
S/G/Y/R/B/O |
NT_024862 | AC131055 | 23436016 | 2 |   |   | AC132825 | 23973149 | | 56379 | 0 | 0 | 56379 |
S/G/Y/R/B/O |
NT_024862 | AC126329 | 23590211 | 2 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_024862 | AC126329 | 23590211 | 2 |   |   | AC091134 | 23973149 | | 36915 | 0 | 0 | 36915 |
S/G/Y/R/B/O |
NT_024862 | AC126329 | 23590211 | 2 |   |   | AC131273 | 23973149 | | 16336 | 0 | 0 | 16336 |
S/G/Y/R/B/O |
NT_024862 | AC126329 | 23590211 | 2 |   |   | AC131273 | 23973149 | | 16336 | 0 | 0 | 16336 |
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