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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010755 | AC067852 | 42819404 | 1 | chr17 | NT_010755 | AC100793 | 42978729 | 2 | 13006 | 0 | 0 | 13006 |
S/G/Y/R/B/O |
NT_010755 | AC067852 | 42819404 | 1 |   |   | AC002537 | 42474711 | | 46047 | 0 | 2747 | 48794 |
S/G/Y/R/B/O |
NT_010755 | AC067852 | 42819404 | 1 |   |   | AC002537 | 42474711 | | 46047 | 0 | 2747 | 48794 |
S/G/Y/R/B/O |
NT_010755 | AC067852 | 42819404 | 1 |   |   | AC027146 | 853487 | | 28902 | 10192 | 16600 | 55694 |
S/G/Y/R/B/O |
NT_010755 | AC067852 | 42819404 | 1 |   |   | AC027146 | 853487 | | 28902 | 10192 | 16600 | 55694 |
S/G/Y/R/B/O |
NT_010755 | AC100793 | 42978729 | 2 | chr17 | NT_010755 | AC016889 | 43045694 | 2 | 34766 | 0 | 29628 | 64394 |
S/G/Y/R/B/O |
NT_010755 | AC100793 | 42978729 | 2 |   |   | AC027146 | 43045694 | | 60802 | 6609 | 1038 | 68449 |
S/G/Y/R/B/O |
NT_010755 | AC100793 | 42978729 | 2 |   |   | AC027146 | 43045694 | | 60802 | 6609 | 1038 | 68449 |
S/G/Y/R/B/O |
NT_010755 | AC016889 | 43045694 | 2 | chr17 | NT_010755 | AC055866 | 43129675 | 3 | 106254 | 0 | 0 | 106254 |
S/G/Y/R/B/O |
NT_010755 | AC016889 | 43045694 | 2 |   |   | AC046171 | 42819404 | | 32804 | 0 | 25309 | 58113 |
S/G/Y/R/B/O |
NT_010755 | AC016889 | 43045694 | 2 |   |   | AC046171 | 42819404 | | 32804 | 0 | 25309 | 58113 |
S/G/Y/R/B/O |
NT_010755 | AC055866 | 43129675 | 3 | chr17 | NT_010755 | L78833 | 43334421 | 3 | 0 | 0 | 8147 | 8147 |
S/G/Y/R/B/O |
NT_010755 | AC055866 | 43129675 | 3 |   |   | AC046171 | 43045694 | | 52307 | 0 | 60642 | 112949 |
S/G/Y/R/B/O |
NT_010755 | AC055866 | 43129675 | 3 |   |   | AC046171 | 43045694 | | 52307 | 0 | 60642 | 112949 |
S/G/Y/R/B/O |
NT_010755 | L78833 | 43334421 | 3 | chr17 | NT_010755 | AC060780 | 43446044 | 3 | 43056 | 0 | 0 | 43056 |
S/G/Y/R/B/O |
NT_010755 | AC060780 | 43446044 | 3 | chr17 | NT_010755 | AC109326 | 43555032 | 2 | 31246 | 0 | 0 | 31246 |
S/G/Y/R/B/O |
NT_010755 | AC060780 | 43446044 | 3 |   |   | AC024051 | 43446044 | | 31748 | 2322 | 4096 | 38166 |
S/G/Y/R/B/O |
NT_010755 | AC060780 | 43446044 | 3 |   |   | AC024051 | 43446044 | | 31748 | 2322 | 4096 | 38166 |
S/G/Y/R/B/O |
NT_010755 | AC109326 | 43555032 | 2 | chr17 | NT_010755 | AC087650 | 43620610 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010755 | AC109326 | 43555032 | 2 |   |   | AC024051 | 43334421 | | 28330 | 2770 | 2543 | 33643 |
S/G/Y/R/B/O |
NT_010755 | AC109326 | 43555032 | 2 |   |   | AC024051 | 43334421 | | 28330 | 2770 | 2543 | 33643 |
S/G/Y/R/B/O |
NT_010755 | AC087650 | 43620610 | 3 | chr17 | NT_010755 | AC068675 | 43753567 | 1 | 0 | 0 | 4860 | 4860 |
S/G/Y/R/B/O |
NT_010755 | AC087650 | 43620610 | 3 |   |   | AC022278 | 43446044 | | 19640 | 0 | 39687 | 59327 |
S/G/Y/R/B/O |
NT_010755 | AC068675 | 43753567 | 1 | chr17 | NT_010755 | AC004149 | 43864839 | 3 | 48328 | 0 | 0 | 48328 |
S/G/Y/R/B/O |
NT_010755 | AC068675 | 43753567 | 1 |   |   | AC073954 | 43864839 | | 36337 | 4146 | 11541 | 52024 |
S/G/Y/R/B/O |
NT_010755 | AC068675 | 43753567 | 1 |   |   | AC073954 | 43864839 | | 36337 | 4146 | 11541 | 52024 |
S/G/Y/R/B/O |
NT_010755 | AC004149 | 43864839 | 3 | chr17 | NT_010755 | AC055813 | 43949606 | 3 | 2488 | 0 | 0 | 2488 |
S/G/Y/R/B/O |
NT_010755 | AC004149 | 43864839 | 3 |   |   | AC073954 | 43753567 | | 43741 | 4282 | 23126 | 71149 |
S/G/Y/R/B/O |
NT_010755 | AC055813 | 43949606 | 3 | chr17 | NT_010755 | AC003098 | 44027234 | 3 | 23137 | 0 | 0 | 23137 |
S/G/Y/R/B/O |
NT_010755 | AC055813 | 43949606 | 3 |   |   | AC073954 | 43864839 | | 14010 | 0 | 36865 | 50875 |
S/G/Y/R/B/O |
NT_010755 | AC003098 | 44027234 | 3 | chr17 | NT_010755 | AC015937 | 44098808 | 3 | 0 | 0 | 1656 | 1656 |
S/G/Y/R/B/O |
NT_010755 | AC015937 | 44098808 | 3 | chr17 | NT_010755 | AC007993 | 44116385 | 3 | 2002 | 0 | 0 | 2002 |
S/G/Y/R/B/O |
NT_010755 | AC007993 | 44116385 | 3 | chr17 | NT_010755 | AC023855 | 44256087 | 3 | 12233 | 0 | 0 | 12233 |
S/G/Y/R/B/O |
NT_010755 | AC007993 | 44116385 | 3 |   |   | AC078837 | 44256087 | | 20200 | 11537 | 50868 | 82605 |
S/G/Y/R/B/O |
NT_010755 | AC023855 | 44256087 | 3 | chr17 | NT_010755 | AC004596 | 44383756 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010755 | AC023855 | 44256087 | 3 |   |   | AC004150 | 44256087 | | 120596 | 0 | 0 | 120596 |
S/G/Y/R/B/O |
NT_010755 | AC023855 | 44256087 | 3 |   |   | AC078837 | 44116385 | | 10938 | 0 | 24371 | 35309 |
S/G/Y/R/B/O |
NT_010755 | AC004596 | 44383756 | 3 | chr17 | NT_010755 | AC003102 | 44476394 | 3 | 0 | 1706 | 0 | 1706 |
S/G/Y/R/B/O |
NT_010755 | AC003102 | 44476394 | 3 | chr17 | NT_010755 | AC003043 | 44505668 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_010755 | AC003043 | 44505668 | 3 | chr17 | NT_010755 | AC007722 | 44643154 | 3 | 13315 | 0 | 0 | 13315 |
S/G/Y/R/B/O |
NT_010755 | AC003043 | 44505668 | 3 |   |   | AC019151 | 44643154 | | 42071 | 8930 | 31803 | 82804 |
S/G/Y/R/B/O |
NT_010755 | AC003043 | 44505668 | 3 |   |   | AC019152 | 44643154 | | 62953 | 0 | 50250 | 113203 |
S/G/Y/R/B/O |
NT_010755 | AC007722 | 44643154 | 3 | chr17 | NT_010755 | AC103703 | 44705535 | 3 | 5135 | 0 | 0 | 5135 |
S/G/Y/R/B/O |
NT_010755 | AC007722 | 44643154 | 3 |   |   | AC019151 | 44505668 | | 50252 | 1498 | 5480 | 57230 |
S/G/Y/R/B/O |
NT_010755 | AC007722 | 44643154 | 3 |   |   | AC019152 | 44505668 | | 70190 | 0 | 0 | 70190 |
S/G/Y/R/B/O |
NT_010755 | AC103703 | 44705535 | 3 | chr17 | NT_010755 | AC091152 | 44803452 | 3 | 41185 | 0 | 0 | 41185 |
S/G/Y/R/B/O |
NT_010755 | AC091152 | 44803452 | 3 | chr17 | NT_010755 | AC005180 | 44970919 | 3 | 14340 | 0 | 0 | 14340 |
S/G/Y/R/B/O |
NT_010755 | AC005180 | 44970919 | 3 | chr17 | NT_010755 | AC015936 | 45097534 | 2 | 17255 | 0 | 0 | 17255 |
S/G/Y/R/B/O |
NT_010755 | AC005180 | 44970919 | 3 |   |   | AC002557 | 44705535 | | 28419 | 0 | 0 | 28419 |
S/G/Y/R/B/O |
NT_010755 | AC015936 | 45097534 | 2 | chr17 | NT_010755 | AC002117 | 45239814 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010755 | AC015936 | 45097534 | 2 | chr17 | NT_010755 | AC116493 | 45296200 | 2 | 21857 | 2942 | 34884 | 59683 |
S/G/Y/R/B/O |
NT_010755 | AC015936 | 45097534 | 2 | chr17 | NT_010755 | AC116493 | 45296200 | 2 | 21857 | 2942 | 34884 | 59683 |
S/G/Y/R/B/O |
NT_010755 | AC002117 | 45239814 | 3 | chr17 | NT_010755 | AC116493 | 45296200 | 2 | 15351 | 0 | 19907 | 35258 |
S/G/Y/R/B/O |
NT_010755 | AC116493 | 45296200 | 2 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010755 | AC116493 | 45296200 | 2 | chr17 | NT_010755 | AC015936 | 45097534 | 2 | 21857 | 2942 | 34884 | 59683 |
S/G/Y/R/B/O |
NT_010755 | AC116493 | 45296200 | 2 | chr17 | NT_010755 | AC015936 | 45097534 | 2 | 21857 | 2942 | 34884 | 59683 |
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