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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 | chr17 | NT_037951 | AC087499 | 22089235 | 3 | 41960 | 0 | 0 | 41960 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 | chr17 | NT_030843 | AC127538 | 19827266 | 1 | 50721 | 0 | 41632 | 92353 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 | chr17 | NT_030843 | AC127538 | 19827266 | 1 | 50721 | 0 | 41632 | 92353 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AC022319 | 19632653 | | 20140 | 0 | 16679 | 36819 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AC022319 | 19632653 | | 20140 | 0 | 16679 | 36819 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AC073519 | 19978775 | | 30588 | 2559 | 30143 | 63290 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AC073519 | 19978775 | | 30588 | 2559 | 30143 | 63290 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AL353997 | 19827266 | | 50754 | 0 | 0 | 50754 |
S/G/Y/R/B/O |
NT_037951 | AC015818 | 21936396 | 2 |   |   | AL353997 | 19827266 | | 50754 | 0 | 0 | 50754 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 | chr17 | NT_037951 | AC126365 | 22154746 | 3 | 130073 | 0 | 0 | 130073 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC022319 | 21936396 | | 82442 | 4996 | 45979 | 133417 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC106031 | 21936396 | | 19904 | 0 | 15014 | 34918 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC120031 | 21936396 | | 36566 | 0 | 32747 | 69313 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC126362 | 21936396 | | 28060 | 3207 | 1691 | 32958 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC127512 | 22154746 | | 14556 | 0 | 68859 | 83415 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC127512 | 22154746 | | 14556 | 0 | 68859 | 83415 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC129489 | 22154746 | | 36436 | 0 | 0 | 36436 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AC131270 | 22154746 | | 80767 | 0 | 10450 | 91217 |
S/G/Y/R/B/O |
NT_037951 | AC087499 | 22089235 | 3 |   |   | AL356743 | 22154746 | | 66198 | 0 | 16962 | 83160 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 | chr17 | NT_037951 | AC090774 | 22306170 | 3 | 42782 | 0 | 0 | 42782 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC022319 | 22154746 | | 53699 | 4997 | 15385 | 74081 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC106031 | 22306170 | | 44027 | 0 | 0 | 44027 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC120031 | 22306170 | | 63426 | 0 | 32729 | 96155 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC126362 | 22306170 | | 40871 | 3203 | 2767 | 46841 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC129489 | 22306170 | | 84534 | 0 | 16388 | 100922 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AC131270 | 22306170 | | 144341 | 0 | 47297 | 191638 |
S/G/Y/R/B/O |
NT_037951 | AC126365 | 22154746 | 3 |   |   | AL356743 | 22306170 | | 81969 | 2887 | 20320 | 105176 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 | chr17 | NT_037951 | AC107926 | 22513588 | 3 | 156617 | 0 | 0 | 156617 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AC120031 | 22513588 | | 75987 | 1552 | 0 | 77539 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AC127512 | 22154746 | | 41529 | 0 | 0 | 41529 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AC127512 | 22154746 | | 41529 | 0 | 0 | 41529 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AC129489 | 22154746 | | 57725 | 2363 | 17593 | 77681 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AC131270 | 22154746 | | 42686 | 0 | 0 | 42686 |
S/G/Y/R/B/O |
NT_037951 | AC090774 | 22306170 | 3 |   |   | AL356743 | 22154746 | | 42477 | 1392 | 2071 | 45940 |
S/G/Y/R/B/O |
NT_037951 | AC107926 | 22513588 | 3 | chr17 | NT_037951 | AC087393 | 22532623 | 3 | 5027 | 0 | 0 | 5027 |
S/G/Y/R/B/O |
NT_037951 | AC107926 | 22513588 | 3 |   |   | AC120031 | 22306170 | | 26203 | 0 | 278 | 26481 |
S/G/Y/R/B/O |
NT_037951 | AC107926 | 22513588 | 3 |   |   | AL356743 | 22306170 | | 10099 | 2307 | 0 | 12406 |
S/G/Y/R/B/O |
NT_037951 | AC087393 | 22532623 | 3 | chr17 | NT_037951 | AC087294 | 22763562 | 2 | 40538 | 0 | 0 | 40538 |
S/G/Y/R/B/O |
NT_037951 | AC087393 | 22532623 | 3 |   |   | AC022214 | 22306170 | | 118149 | 0 | 14863 | 133012 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 | chr17 | NT_037951 | AC068418 | 22827933 | 3 | 72396 | 0 | 0 | 72396 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC021099 | 22513588 | | 48025 | 11771 | 59192 | 118988 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC021099 | 22513588 | | 48025 | 11771 | 59192 | 118988 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC022214 | 22513588 | | 28701 | 0 | 11624 | 40325 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC022214 | 22513588 | | 28701 | 0 | 11624 | 40325 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC116378 | 22532623 | | 10934 | 13016 | 28547 | 52497 |
S/G/Y/R/B/O |
NT_037951 | AC087294 | 22763562 | 2 |   |   | AC116378 | 22532623 | | 10934 | 13016 | 28547 | 52497 |
S/G/Y/R/B/O |
NT_037951 | AC068418 | 22827933 | 3 | chr17 | NT_037951 | AC113144 | 22900340 | 3 | 130343 | 0 | 0 | 130343 |
S/G/Y/R/B/O |
NT_037951 | AC068418 | 22827933 | 3 |   |   | AC021099 | 22532623 | | 21244 | 0 | 21033 | 42277 |
S/G/Y/R/B/O |
NT_037951 | AC068418 | 22827933 | 3 |   |   | AC113553 | 22900340 | | 24800 | 0 | 0 | 24800 |
S/G/Y/R/B/O |
NT_037951 | AC068418 | 22827933 | 3 |   |   | AC116378 | 22900340 | | 38093 | 15202 | 32836 | 86131 |
S/G/Y/R/B/O |
NT_037951 | AC113144 | 22900340 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_037951 | AC113144 | 22900340 | 3 |   |   | AC116378 | 22827933 | | 27136 | 2186 | 7547 | 36869 |
S/G/Y/R/B/O |
NT_037951 | AC113144 | 22900340 | 3 |   |   | AC116378 | 22827933 | | 27136 | 2186 | 7547 | 36869 |
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