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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_035430 | AC005332 | 69067867 | 3 | chr17 | NT_035430 | AC007780 | 69284498 | 3 | 4207 | 0 | 0 | 4207 |
S/G/Y/R/B/O |
NT_035430 | AC007780 | 69284498 | 3 | chr17 | NT_035430 | AC079210 | 69441780 | 2 | 47143 | 0 | 0 | 47143 |
S/G/Y/R/B/O |
NT_035430 | AC079210 | 69441780 | 2 | chr17 | NT_035430 | AC005799 | 69478573 | 3 | 107517 | 0 | 0 | 107517 |
S/G/Y/R/B/O |
NT_035430 | AC005799 | 69478573 | 3 | chr17 | NT_035430 | AC011591 | 69633475 | 3 | 5828 | 0 | 0 | 5828 |
S/G/Y/R/B/O |
NT_035430 | AC011591 | 69633475 | 3 | chr17 | NT_035430 | AC015844 | 69752426 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035430 | AC015844 | 69752426 | 3 | chr17 | NT_035430 | AC005922 | 69902979 | 3 | 5219 | 0 | 0 | 5219 |
S/G/Y/R/B/O |
NT_035430 | AC005922 | 69902979 | 3 | chr17 | NT_035430 | AC005495 | 70038437 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035430 | AC005495 | 70038437 | 3 | chr17 | NT_035430 | AC115085 | 70221691 | 3 | 22531 | 0 | 0 | 22531 |
S/G/Y/R/B/O |
NT_035430 | AC115085 | 70221691 | 3 | chr17 | NT_035430 | AC015920 | 70362330 | 3 | 90413 | 0 | 0 | 90413 |
S/G/Y/R/B/O |
NT_035430 | AC115085 | 70221691 | 3 |   |   | AC007763 | 70038437 | | 83731 | 0 | 48713 | 132444 |
S/G/Y/R/B/O |
NT_035430 | AC115085 | 70221691 | 3 |   |   | AC016704 | 70362330 | | 72550 | 0 | 36918 | 109468 |
S/G/Y/R/B/O |
NT_035430 | AC015920 | 70362330 | 3 | chr17 | NT_035430 | AC002546 | 70415893 | 3 | 5753 | 0 | 0 | 5753 |
S/G/Y/R/B/O |
NT_035430 | AC015920 | 70362330 | 3 |   |   | AC007763 | 70415893 | | 35674 | 0 | 0 | 35674 |
S/G/Y/R/B/O |
NT_035430 | AC015920 | 70362330 | 3 |   |   | AC016704 | 70415893 | | 90092 | 1985 | 5881 | 97958 |
S/G/Y/R/B/O |
NT_035430 | AC015920 | 70362330 | 3 |   |   | AC080147 | 70415893 | | 22936 | 1260 | 0 | 24196 |
S/G/Y/R/B/O |
NT_035430 | AC015920 | 70362330 | 3 |   |   | AC115985 | 70221691 | | 29604 | 0 | 0 | 29604 |
S/G/Y/R/B/O |
NT_035430 | AC002546 | 70415893 | 3 | chr17 | NT_035430 | AC003051 | 70522313 | 3 | 0 | 775 | 0 | 775 |
S/G/Y/R/B/O |
NT_035430 | AC002546 | 70415893 | 3 |   |   | AC080147 | 70362330 | | 99361 | 1855 | 4096 | 105312 |
S/G/Y/R/B/O |
NT_035430 | AC002546 | 70415893 | 3 |   |   | AC080178 | 70362330 | | 94441 | 3376 | 1332 | 99149 |
S/G/Y/R/B/O |
NT_035430 | AC003051 | 70522313 | 3 | chr17 | NT_035430 | AC002545 | 70641923 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035430 | AC003051 | 70522313 | 3 |   |   | AC069105 | 70415893 | | 49853 | 0 | 0 | 49853 |
S/G/Y/R/B/O |
NT_035430 | AC003051 | 70522313 | 3 |   |   | AC080147 | 70415893 | | 12377 | 0 | 0 | 12377 |
S/G/Y/R/B/O |
NT_035430 | AC003051 | 70522313 | 3 |   |   | AC080178 | 70415893 | | 31498 | 0 | 0 | 31498 |
S/G/Y/R/B/O |
NT_035430 | AC002545 | 70641923 | 3 | chr17 | NT_035430 | AC004756 | 70695635 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035430 | AC004756 | 70695635 | 3 | chr17 | NT_035430 | AC002538 | 70765369 | 3 | 0 | 1999 | 0 | 1999 |
S/G/Y/R/B/O |
NT_035430 | AC002538 | 70765369 | 3 | chr17 | NT_035430 | AC002539 | 70870161 | 3 | 17891 | 0 | 0 | 17891 |
S/G/Y/R/B/O |
NT_035430 | AC002539 | 70870161 | 3 | chr17 | NT_035430 | AC004562 | 70939485 | 3 | 68460 | 0 | 0 | 68460 |
S/G/Y/R/B/O |
NT_035430 | AC004562 | 70939485 | 3 | chr17 | NT_035430 | AC005208 | 71004778 | 3 | 23484 | 0 | 0 | 23484 |
S/G/Y/R/B/O |
NT_035430 | AC005208 | 71004778 | 3 | chr17 | NT_035430 | AC005242 | 71104462 | 3 | 0 | 2000 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035430 | AC005242 | 71104462 | 3 | chr17 | NT_035430 | AC011990 | 71262724 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035430 | AC011990 | 71262724 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_035430 | AC011990 | 71262724 | 3 | chr17 | NT_010775 | AC005939 | 71334141 | 3 | 16886 | 0 | 0 | 16886 |
S/G/Y/R/B/O |
NT_035430 | AC011990 | 71262724 | 3 |   |   | AC058801 | 71334141 | | 42397 | 0 | 0 | 42397 |
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