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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_035426 | AC022732 | 59715080 | 1 | chr17 | NT_035426 | AC113210 | 59716997 | 2 | 53452 | 2209 | 31436 | 87097 |
S/G/Y/R/B/O |
NT_035426 | AC022732 | 59715080 | 1 | chr17 | NT_035426 | AC091059 | 59800813 | 2 | 10050 | 2203 | 4708 | 16961 |
S/G/Y/R/B/O |
NT_035426 | AC022732 | 59715080 | 1 |   |   | AC018718 | 59573834 | | 12888 | 2630 | 7086 | 22604 |
S/G/Y/R/B/O |
NT_035426 | AC022732 | 59715080 | 1 |   |   | AC027214 | 59573834 | | 11513 | 7685 | 5358 | 24556 |
S/G/Y/R/B/O |
NT_035426 | AC022732 | 59715080 | 1 |   |   | AC069293 | 59573834 | | 47658 | 5427 | 31877 | 84962 |
S/G/Y/R/B/O |
NT_035426 | AC113210 | 59716997 | 2 | chr17 | NT_035426 | AC091059 | 59800813 | 2 | 66884 | 0 | 15151 | 82035 |
S/G/Y/R/B/O |
NT_035426 | AC113210 | 59716997 | 2 |   |   | AC018718 | 59716997 | | 27343 | 0 | 33086 | 60429 |
S/G/Y/R/B/O |
NT_035426 | AC113210 | 59716997 | 2 |   |   | AC069293 | 59715080 | | 78206 | 2512 | 42587 | 123305 |
S/G/Y/R/B/O |
NT_035426 | AC091059 | 59800813 | 2 | chr17 | NT_035426 | AC005667 | 59896122 | 3 | 71487 | 0 | 0 | 71487 |
S/G/Y/R/B/O |
NT_035426 | AC091059 | 59800813 | 2 | chr17 | NT_035426 | AC022732 | 59715080 | 1 | 10050 | 2203 | 4708 | 16961 |
S/G/Y/R/B/O |
NT_035426 | AC091059 | 59800813 | 2 |   |   | AC018718 | 59896122 | | 90907 | 1654 | 37544 | 130105 |
S/G/Y/R/B/O |
NT_035426 | AC091059 | 59800813 | 2 |   |   | AC069293 | 59715080 | | 38148 | 2517 | 15657 | 56322 |
S/G/Y/R/B/O |
NT_035426 | AC005667 | 59896122 | 3 | chr17 | NT_035426 | AC004167 | 59990228 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035426 | AC005667 | 59896122 | 3 |   |   | AC018718 | 59990228 | | 47773 | 0 | 11470 | 59243 |
S/G/Y/R/B/O |
NT_035426 | AC004167 | 59990228 | 3 | chr17 | NT_035426 | AC091271 | 60113103 | 3 | 5467 | 0 | 0 | 5467 |
S/G/Y/R/B/O |
NT_035426 | AC004167 | 59990228 | 3 |   |   | AC074102 | 59896122 | | 25107 | 0 | 8641 | 33748 |
S/G/Y/R/B/O |
NT_035426 | AC091271 | 60113103 | 3 | chr17 | NT_035426 | AC040904 | 60243419 | 3 | 74078 | 0 | 0 | 74078 |
S/G/Y/R/B/O |
NT_035426 | AC091271 | 60113103 | 3 |   |   | AC074102 | 60243419 | | 58397 | 11533 | 33677 | 103607 |
S/G/Y/R/B/O |
NT_035426 | AC040904 | 60243419 | 3 | chr17 | NT_035426 | AC025858 | 60296235 | 1 | 0 | 0 | 52646 | 52646 |
S/G/Y/R/B/O |
NT_035426 | AC040904 | 60243419 | 3 |   |   | AC074102 | 60296235 | | 27801 | 6304 | 16316 | 50421 |
S/G/Y/R/B/O |
NT_035426 | AC040904 | 60243419 | 3 |   |   | AL353694 | 60113103 | | 24605 | 0 | 23549 | 48154 |
S/G/Y/R/B/O |
NT_035426 | AC025858 | 60296235 | 1 | chr17 | NT_035426 | AC004686 | 60348816 | 3 | 51962 | 0 | 21409 | 73371 |
S/G/Y/R/B/O |
NT_035426 | AC025858 | 60296235 | 1 |   |   | AL353694 | 60243419 | | 16378 | 0 | 22891 | 39269 |
S/G/Y/R/B/O |
NT_035426 | AC025858 | 60296235 | 1 |   |   | AL353694 | 60243419 | | 16378 | 0 | 22891 | 39269 |
S/G/Y/R/B/O |
NT_035426 | AC004686 | 60348816 | 3 | chr17 | NT_035426 | AC005702 | 60482293 | 3 | 0 | 0 | 36533 | 36533 |
S/G/Y/R/B/O |
NT_035426 | AC005702 | 60482293 | 3 | chr17 | NT_035426 | AC025048 | 60592995 | 3 | 15375 | 0 | 0 | 15375 |
S/G/Y/R/B/O |
NT_035426 | AC025048 | 60592995 | 3 | chr17 | NT_035426 | AC104763 | 60715541 | 2 | 27740 | 0 | 0 | 27740 |
S/G/Y/R/B/O |
NT_035426 | AC025048 | 60592995 | 3 |   |   | AC023352 | 60482293 | | 93632 | 2027 | 11033 | 106692 |
S/G/Y/R/B/O |
NT_035426 | AC025048 | 60592995 | 3 |   |   | AC090167 | 60482293 | | 80912 | 0 | 20055 | 100967 |
S/G/Y/R/B/O |
NT_035426 | AC104763 | 60715541 | 2 | chr17 | NT_035426 | AC003962 | 60777216 | 3 | 19462 | 0 | 78483 | 97945 |
S/G/Y/R/B/O |
NT_035426 | AC104763 | 60715541 | 2 |   |   | AC023352 | 60777216 | | 61186 | 0 | 14519 | 75705 |
S/G/Y/R/B/O |
NT_035426 | AC104763 | 60715541 | 2 |   |   | AC023352 | 60777216 | | 61186 | 0 | 14519 | 75705 |
S/G/Y/R/B/O |
NT_035426 | AC003962 | 60777216 | 3 | chr17 | NT_035426 | AC037475 | 60878586 | 3 | 0 | 1997 | 0 | 1997 |
S/G/Y/R/B/O |
NT_035426 | AC003962 | 60777216 | 3 |   |   | AC023352 | 60592995 | | 10567 | 0 | 17999 | 28566 |
S/G/Y/R/B/O |
NT_035426 | AC037475 | 60878586 | 3 | chr17 | NT_035426 | AC011921 | 60992514 | 3 | 16151 | 0 | 0 | 16151 |
S/G/Y/R/B/O |
NT_035426 | AC011921 | 60992514 | 3 | chr17 | NT_035426 | AC111155 | 61130280 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035426 | AC011921 | 60992514 | 3 |   |   | AC025515 | 60992514 | | 34920 | 0 | 7498 | 42418 |
S/G/Y/R/B/O |
NT_035426 | AC111155 | 61130280 | 3 | chr17 | NT_035426 | AC110602 | 61150536 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035426 | AC110602 | 61150536 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_035426 | AC110602 | 61150536 | 3 |   |   | AC025515 | 60992514 | | 57628 | 0 | 17767 | 75395 |
S/G/Y/R/B/O |
NT_035426 | AC110602 | 61150536 | 3 |   |   | AC025515 | 60992514 | | 57628 | 0 | 17767 | 75395 |
S/G/Y/R/B/O |
NT_035426 | AC110602 | 61150536 | 3 |   |   | AC079202 | 60992514 | | 16016 | 24214 | 20778 | 61008 |
S/G/Y/R/B/O |
NT_035426 | AC110602 | 61150536 | 3 |   |   | AC079202 | 60992514 | | 16016 | 24214 | 20778 | 61008 |
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