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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_010404 | AC135049 | 89337421 | 2 | chr16 | NT_010404 | AC132805 | 89416929 | 3 | 26006 | 0 | 0 | 26006 |
S/G/Y/R/B/O |
NT_010404 | AC135049 | 89337421 | 2 |   |   | AC132804 | 88973730 | | 21170 | 0 | 0 | 21170 |
S/G/Y/R/B/O |
NT_010404 | AC135049 | 89337421 | 2 |   |   | AC132804 | 88973730 | | 21170 | 0 | 0 | 21170 |
S/G/Y/R/B/O |
NT_010404 | AC135049 | 89337421 | 2 |   |   | AC133570 | 89416929 | | 16122 | 0 | 0 | 16122 |
S/G/Y/R/B/O |
NT_010404 | AC135049 | 89337421 | 2 |   |   | AC135045 | 89416929 | | 53826 | 0 | 1526 | 55352 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 | chr16 | NT_010404 | AC116552 | 89527587 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 |   |   | AC026467 | 89416929 | | 20876 | 0 | 0 | 20876 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 |   |   | AC132804 | 89416929 | | 30105 | 0 | 0 | 30105 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 |   |   | AC132804 | 89416929 | | 30105 | 0 | 0 | 30105 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 |   |   | AC133570 | 89416929 | | 24641 | 0 | 0 | 24641 |
S/G/Y/R/B/O |
NT_010404 | AC132805 | 89416929 | 3 |   |   | AC135045 | 89416929 | | 26551 | 0 | 0 | 26551 |
S/G/Y/R/B/O |
NT_010404 | AC116552 | 89527587 | 3 | chr16 | NT_010404 | AC103886 | 89701567 | 1 | 15335 | 0 | 0 | 15335 |
S/G/Y/R/B/O |
NT_010404 | AC116552 | 89527587 | 3 |   |   | AC026467 | 89337421 | | 51208 | 0 | 0 | 51208 |
S/G/Y/R/B/O |
NT_010404 | AC116552 | 89527587 | 3 |   |   | AC103884 | 89337421 | | 155372 | 0 | 0 | 155372 |
S/G/Y/R/B/O |
NT_010404 | AC116552 | 89527587 | 3 |   |   | AC135045 | 89701567 | | 39239 | 0 | 0 | 39239 |
S/G/Y/R/B/O |
NT_010404 | AC103886 | 89701567 | 1 | chr16 | NT_010404 | AC135782 | 89787882 | 2 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_010404 | AC103886 | 89701567 | 1 | chr16 | NT_010404 | AC092384 | 89948235 | 2 | 11400 | 0 | 0 | 11400 |
S/G/Y/R/B/O |
NT_010404 | AC103886 | 89701567 | 1 |   |   | AC021591 | 90027890 | | 41203 | 2622 | 43088 | 86913 |
S/G/Y/R/B/O |
NT_010404 | AC103886 | 89701567 | 1 |   |   | AC074303 | 90027890 | | 11370 | 0 | 0 | 11370 |
S/G/Y/R/B/O |
NT_010404 | AC135782 | 89787882 | 2 | chr16 | NT_010404 | AC092384 | 89948235 | 2 | 13798 | 0 | 12018 | 25816 |
S/G/Y/R/B/O |
NT_010404 | AC135782 | 89787882 | 2 |   |   | AC074303 | 89527587 | | 12406 | 0 | 11721 | 24127 |
S/G/Y/R/B/O |
NT_010404 | AC092384 | 89948235 | 2 | chr16 | NT_010404 | AC009149 | 90027890 | 1 | 129922 | 7597 | 26905 | 164424 |
S/G/Y/R/B/O |
NT_010404 | AC092384 | 89948235 | 2 | chr16 | NT_010404 | AC103886 | 89701567 | 1 | 11400 | 0 | 0 | 11400 |
S/G/Y/R/B/O |
NT_010404 | AC092384 | 89948235 | 2 |   |   | AC021125 | 90027890 | | 70091 | 6950 | 73076 | 150117 |
S/G/Y/R/B/O |
NT_010404 | AC092384 | 89948235 | 2 |   |   | AC021591 | 90027890 | | 66075 | 0 | 1372 | 67447 |
S/G/Y/R/B/O |
NT_010404 | AC092384 | 89948235 | 2 |   |   | AC074303 | 90027890 | | 11335 | 0 | 69270 | 80605 |
S/G/Y/R/B/O |
NT_010404 | AC009149 | 90027890 | 1 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010404 | AC009149 | 90027890 | 1 |   |   | AC021125 | 83398465 | | 58875 | 12634 | 55738 | 127247 |
S/G/Y/R/B/O |
NT_010404 | AC009149 | 90027890 | 1 |   |   | AC021591 | 83398465 | | 87787 | 2975 | 3599 | 94361 |
S/G/Y/R/B/O |
NT_010404 | AC009149 | 90027890 | 1 |   |   | AC074303 | 83398465 | | 78730 | 5397 | 49550 | 133677 |
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