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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 | chr16 | NT_024779 | AC007028 | 34320716 | 3 | 19653 | 0 | 0 | 19653 |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 | chr16 | NT_037893 | AC002042 | 34844921 | 1 | 30540 | 0 | 0 | 30540 |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 |   |   | AC036220 | 34320716 | | 26385 | 1883 | 28712 | 56980 |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 |   |   | AC044899 | 34320716 | | 42842 | 0 | 3329 | 46171 |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 |   |   | AC127536 | 34320716 | | 163144 | 0 | 0 | 163144 |
S/G/Y/R/B/O |
NT_024779 | AC092342 | 34150392 | 3 |   |   | AC127536 | 34320716 | | 163144 | 0 | 0 | 163144 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 | chr16 | NT_024779 | AC009057 | 34449863 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 | chr16 | NT_024812 | AC092144 | 32468745 | 3 | 15813 | 0 | 0 | 15813 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC004529 | 34320716 | | 33645 | 0 | 0 | 33645 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC022264 | 34320716 | | 51420 | 0 | 17246 | 68666 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC036220 | 34320716 | | 77631 | 4227 | 14270 | 96128 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC044899 | 34320716 | | 81692 | 8151 | 6556 | 96399 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC068199 | 34320716 | | 26788 | 0 | 3598 | 30386 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC127536 | 34150392 | | 12555 | 0 | 0 | 12555 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC127536 | 34150392 | | 12555 | 0 | 0 | 12555 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC136428 | 34150392 | | 121966 | 0 | 0 | 121966 |
S/G/Y/R/B/O |
NT_024779 | AC007028 | 34320716 | 3 |   |   | AC136445 | 34150392 | | 23934 | 0 | 0 | 23934 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 | chr16 | NT_024779 | AC133561 | 34583440 | 2 | 29196 | 0 | 64221 | 93417 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 | chr16 | NT_035382 | AC133536 | 33005418 | 1 | 18691 | 0 | 47157 | 65848 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 | chr16 | NT_035382 | AC136440 | 32829517 | 2 | 119689 | 1934 | 0 | 121623 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC002041 | 34150392 | | 65806 | 0 | 0 | 65806 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC004529 | 34150392 | | 46461 | 0 | 63095 | 109556 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC068199 | 34150392 | | 42026 | 2563 | 25587 | 70176 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC136439 | 34583440 | | 24027 | 2676 | 2170 | 28873 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC136445 | 32829517 | | 144184 | 0 | 664 | 144848 |
S/G/Y/R/B/O |
NT_024779 | AC009057 | 34449863 | 3 |   |   | AC136616 | 32829517 | | 88596 | 0 | 42984 | 131580 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 | chr16 | NT_024779 | AC084376 | 34596741 | 1 | 0 | 1830 | 12565 | 14395 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 | chr16 | NT_035382 | AC010539 | 33021678 | 3 | 42135 | 0 | 0 | 42135 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 | chr16 | NT_035382 | AC133536 | 33005418 | 1 | 60447 | 0 | 14413 | 74860 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 | chr16 | NT_035382 | AC136440 | 32829517 | 2 | 83499 | 1934 | 21082 | 106515 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 |   |   | AC002041 | 32829517 | | 42069 | 0 | 18963 | 61032 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 |   |   | AC092277 | 32468745 | | 53849 | 0 | 0 | 53849 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 |   |   | AC136439 | 33005418 | | 34472 | 1854 | 2168 | 38494 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 |   |   | AC136445 | 32829517 | | 79303 | 0 | 0 | 79303 |
S/G/Y/R/B/O |
NT_024779 | AC133561 | 34583440 | 2 |   |   | AC136616 | 32829517 | | 100029 | 0 | 16030 | 116059 |
S/G/Y/R/B/O |
NT_024779 | AC084376 | 34596741 | 1 |   |   |   |   |   |   |   |   |   |
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