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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_034001 | AC040159 | 63118409 | 3 | chr16 | NT_034001 | AC040174 | 63236930 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034001 | AC040159 | 63118409 | 3 | chr16 | NT_010498 | AC009111 | 63037531 | 3 | 48557 | 0 | 0 | 48557 |
S/G/Y/R/B/O |
NT_034001 | AC040159 | 63118409 | 3 |   |   | AC004514 | 63118409 | | 118520 | 0 | 0 | 118520 |
S/G/Y/R/B/O |
NT_034001 | AC040159 | 63118409 | 3 |   |   | AC119049 | 63037531 | | 118521 | 0 | 0 | 118521 |
S/G/Y/R/B/O |
NT_034001 | AC040174 | 63236930 | 3 | chr16 | NT_034001 | AC004513 | 63249421 | 3 | 6296 | 0 | 0 | 6296 |
S/G/Y/R/B/O |
NT_034001 | AC004513 | 63249421 | 3 | chr16 | NT_034001 | AC117984 | 63344432 | 3 | 0 | 0 | 230 | 230 |
S/G/Y/R/B/O |
NT_034001 | AC117984 | 63344432 | 3 | chr16 | NT_034001 | AC012176 | 63353530 | 3 | 0 | 0 | 217 | 217 |
S/G/Y/R/B/O |
NT_034001 | AC012176 | 63353530 | 3 | chr16 | NT_034001 | AC003977 | 63477714 | 3 | 37822 | 0 | 0 | 37822 |
S/G/Y/R/B/O |
NT_034001 | AC012176 | 63353530 | 3 |   |   | AC021674 | 63477714 | | 38847 | 0 | 0 | 38847 |
S/G/Y/R/B/O |
NT_034001 | AC003977 | 63477714 | 3 | chr16 | NT_034001 | AC012172 | 63608205 | 3 | 77006 | 0 | 0 | 77006 |
S/G/Y/R/B/O |
NT_034001 | AC003977 | 63477714 | 3 |   |   | AC021674 | 63353530 | | 113191 | 2187 | 3695 | 119073 |
S/G/Y/R/B/O |
NT_034001 | AC012172 | 63608205 | 3 | chr16 | NT_034001 | AC009085 | 63665445 | 3 | 17164 | 0 | 0 | 17164 |
S/G/Y/R/B/O |
NT_034001 | AC012172 | 63608205 | 3 |   |   | AC021674 | 63665445 | | 56232 | 0 | 27175 | 83407 |
S/G/Y/R/B/O |
NT_034001 | AC009085 | 63665445 | 3 | chr16 | NT_034001 | AC092126 | 63804141 | 3 | 0 | 0 | 169 | 169 |
S/G/Y/R/B/O |
NT_034001 | AC092126 | 63804141 | 3 | chr16 | NT_034001 | AC018846 | 63826447 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034001 | AC018846 | 63826447 | 3 | chr16 | NT_034001 | AC092337 | 63981580 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034001 | AC018846 | 63826447 | 3 |   |   | AC010534 | 63665445 | | 27409 | 0 | 0 | 27409 |
S/G/Y/R/B/O |
NT_034001 | AC092337 | 63981580 | 3 | chr16 | NT_034001 | AC012177 | 64152888 | 3 | 38071 | 0 | 0 | 38071 |
S/G/Y/R/B/O |
NT_034001 | AC012177 | 64152888 | 3 | chr16 | NT_034001 | AC093536 | 64301493 | 3 | 42060 | 0 | 0 | 42060 |
S/G/Y/R/B/O |
NT_034001 | AC012177 | 64152888 | 3 |   |   | AC009047 | 64152888 | | 11263 | 2064 | 16322 | 29649 |
S/G/Y/R/B/O |
NT_034001 | AC093536 | 64301493 | 3 | chr16 | NT_034001 | AC012322 | 64426164 | 3 | 32845 | 0 | 0 | 32845 |
S/G/Y/R/B/O |
NT_034001 | AC093536 | 64301493 | 3 |   |   | AC009047 | 64301493 | | 81156 | 11984 | 36092 | 129232 |
S/G/Y/R/B/O |
NT_034001 | AC012322 | 64426164 | 3 | chr16 | NT_034001 | AC009109 | 64612315 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034001 | AC012322 | 64426164 | 3 |   |   | AC092286 | 64426164 | | 32528 | 0 | 18528 | 51056 |
S/G/Y/R/B/O |
NT_034001 | AC009109 | 64612315 | 3 | chr16 | NT_034001 | AC092323 | 64656265 | 3 | 5106 | 0 | 0 | 5106 |
S/G/Y/R/B/O |
NT_034001 | AC092323 | 64656265 | 3 | chr16 | NT_034001 | AC092131 | 64680326 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_034001 | AC092131 | 64680326 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_034001 | AC092131 | 64680326 | 3 | chr16 | NT_035364 | AC004533 | 64984377 | 3 | 10652 | 0 | 0 | 10652 |
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