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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 | chr16 | NT_024812 | AC135050 | 31515083 | 2 | 62590 | 0 | 0 | 62590 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC021142 | 31087556 | | 60136 | 6734 | 63824 | 130694 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC021142 | 31087556 | | 60136 | 6734 | 63824 | 130694 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC132806 | 31087556 | | 79618 | 0 | 77489 | 157107 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC132806 | 31087556 | | 79618 | 0 | 77489 | 157107 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC135044 | 31087556 | | 44917 | 0 | 953 | 45870 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC135044 | 31087556 | | 44917 | 0 | 953 | 45870 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC135051 | 31515083 | | 76576 | 0 | 27180 | 103756 |
S/G/Y/R/B/O |
NT_024812 | AC135048 | 31337364 | 3 |   |   | AC135051 | 31515083 | | 76576 | 0 | 27180 | 103756 |
S/G/Y/R/B/O |
NT_024812 | AC135050 | 31515083 | 2 | chr16 | NT_024812 | AC009088 | 31546333 | 3 | 87664 | 0 | 0 | 87664 |
S/G/Y/R/B/O |
NT_024812 | AC135050 | 31515083 | 2 |   |   | AC021142 | 31546333 | | 46821 | 2488 | 24269 | 73578 |
S/G/Y/R/B/O |
NT_024812 | AC135050 | 31515083 | 2 |   |   | AC132806 | 31546333 | | 34994 | 0 | 16796 | 51790 |
S/G/Y/R/B/O |
NT_024812 | AC135050 | 31515083 | 2 |   |   | AC135044 | 31546333 | | 79274 | 4008 | 46649 | 129931 |
S/G/Y/R/B/O |
NT_024812 | AC135050 | 31515083 | 2 |   |   | AC135051 | 31337364 | | 59024 | 0 | 5098 | 64122 |
S/G/Y/R/B/O |
NT_024812 | AC009088 | 31546333 | 3 | chr16 | NT_024812 | AC093520 | 31779638 | 3 | 29124 | 0 | 0 | 29124 |
S/G/Y/R/B/O |
NT_024812 | AC009088 | 31546333 | 3 |   |   | AC135044 | 31779638 | | 50644 | 1976 | 44520 | 97140 |
S/G/Y/R/B/O |
NT_024812 | AC093520 | 31779638 | 3 | chr16 | NT_024812 | AC026471 | 31838376 | 3 | 79979 | 0 | 0 | 79979 |
S/G/Y/R/B/O |
NT_024812 | AC026471 | 31838376 | 3 | chr16 | NT_024812 | AC106730 | 32025246 | 3 | 0 | 1504 | 0 | 1504 |
S/G/Y/R/B/O |
NT_024812 | AC106730 | 32025246 | 3 | chr16 | NT_024812 | AC074050 | 32176482 | 3 | 0 | 0 | 20085 | 20085 |
S/G/Y/R/B/O |
NT_024812 | AC074050 | 32176482 | 3 | chr16 | NT_024812 | AC002519 | 32229856 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024812 | AC002519 | 32229856 | 3 | chr16 | NT_024812 | AC034105 | 32338939 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024812 | AC034105 | 32338939 | 3 | chr16 | NT_024812 | AC092144 | 32468745 | 3 | 104730 | 0 | 0 | 104730 |
S/G/Y/R/B/O |
NT_024812 | AC092144 | 32468745 | 3 | chr16 | NT_024812 | AC006352 | 32563158 | 3 | 20601 | 0 | 0 | 20601 |
S/G/Y/R/B/O |
NT_024812 | AC092144 | 32468745 | 3 | chr16 | NT_024779 | AC007028 | 34320716 | 3 | 15813 | 0 | 0 | 15813 |
S/G/Y/R/B/O |
NT_024812 | AC092144 | 32468745 | 3 |   |   | AC004529 | 34583440 | | 28985 | 0 | 59889 | 88874 |
S/G/Y/R/B/O |
NT_024812 | AC092144 | 32468745 | 3 |   |   | AC068199 | 32338939 | | 21044 | 2561 | 38839 | 62444 |
S/G/Y/R/B/O |
NT_024812 | AC092144 | 32468745 | 3 |   |   | AC136616 | 32829517 | | 12244 | 0 | 74304 | 86548 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 | chr16 | NT_024812 | AC133485 | 32668460 | 3 | 72228 | 0 | 0 | 72228 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 | chr16 | NT_035382 | AC133536 | 33005418 | 1 | 37887 | 0 | 0 | 37887 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC004529 | 32829517 | | 38218 | 0 | 0 | 38218 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC007908 | 32829517 | | 16113 | 0 | 17650 | 33763 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC019340 | 32829517 | | 11893 | 0 | 0 | 11893 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC019340 | 32829517 | | 11893 | 0 | 0 | 11893 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC068199 | 32829517 | | 31337 | 0 | 3621 | 34958 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC133564 | 33005418 | | 17518 | 0 | 0 | 17518 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC136445 | 32829517 | | 27801 | 0 | 0 | 27801 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC136608 | 32829517 | | 92478 | 0 | 2571 | 95049 |
S/G/Y/R/B/O |
NT_024812 | AC006352 | 32563158 | 3 |   |   | AC136616 | 32829517 | | 17243 | 0 | 0 | 17243 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 | chr16 | NT_035382 | AC133536 | 33005418 | 1 | 115766 | 0 | 0 | 115766 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 | chr16 | NT_037893 | AC133551 | 34834934 | 1 | 16522 | 0 | 0 | 16522 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC007908 | 32563158 | | 70589 | 0 | 22406 | 92995 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC133564 | 34834934 | | 113180 | 0 | 21074 | 134254 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC133569 | 34834934 | | 37422 | 0 | 98 | 37520 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC136439 | 33507196 | | 44040 | 0 | 32043 | 76083 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC136608 | 32829517 | | 145970 | 0 | 2571 | 148541 |
S/G/Y/R/B/O |
NT_024812 | AC133485 | 32668460 | 3 |   |   | AC136620 | 32829517 | | 11986 | 0 | 1278 | 13264 |
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