Chromosome 16 - Clone Overlaps

Chromosome 16 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037887	NT_010552	NT_037888	NT_037889	NT_010393	NT_037890	NT_037891	NT_010441
NT_035386	NT_010604	NT_024802	NT_024812	NT_035382	NT_037892	NT_024779	NT_037893
NT_024773	NT_035363	NT_037894	NT_010505	NT_010498	NT_034001	NT_037895	NT_035364
NT_010546	NT_010478	NT_037896	NT_010635	NT_037897	NT_024797	NT_010422	NT_019609
NT_010404	NT_010542

NT_010441

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_010441	AC027346	20523856	1	chr16	NT_010441	AC003034	20580842	3	0	0	11176	11176
S/G/Y/R/B/O	NT_010441	AC003034	20580842	3	chr16	NT_010441	AC020926	20663725	3	0	0	18773	18773
S/G/Y/R/B/O	NT_010441	AC020926	20663725	3	chr16	NT_010441	AC004381	20737891	3	0	0	0	0
S/G/Y/R/B/O	NT_010441	AC020926	20663725	3			AC025829	20580842		42814	4256	7953	55023
S/G/Y/R/B/O	NT_010441	AC004381	20737891	3	chr16	NT_010441	AC002394	20877277	3	2441	0	0	2441
S/G/Y/R/B/O	NT_010441	AC004381	20737891	3			AC025829	20877277		44758	4253	41542	90553
S/G/Y/R/B/O	NT_010441	AC002394	20877277	3	chr16	NT_010441	AC105410	20982746	3	56726	0	0	56726
S/G/Y/R/B/O	NT_010441	AC002394	20877277	3			AC025080	20737891		14295	1592	13024	28911
S/G/Y/R/B/O	NT_010441	AC105410	20982746	3	chr16	NT_010441	AC008551	21059843	3	23571	0	0	23571
S/G/Y/R/B/O	NT_010441	AC105410	20982746	3			AC025080	21059843		74563	8445	9806	92814
S/G/Y/R/B/O	NT_010441	AC008551	21059843	3	chr16	NT_010441	AF001550	21196399	3	43710	0	0	43710
S/G/Y/R/B/O	NT_010441	AC008551	21059843	3			AC025080	21059843		62384	2369	0	64753
S/G/Y/R/B/O	NT_010441	AF001550	21196399	3	chr16	NT_010441	AC008740	21326547	3	14655	0	0	14655
S/G/Y/R/B/O	NT_010441	AF001550	21196399	3			AC008864	21326547		13260	0	0	13260
S/G/Y/R/B/O	NT_010441	AF001550	21196399	3			AC023463	21326547		27414	1179	5705	34298
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3	chr16	NT_010441	AC005632	21470275	3	15245	0	0	15245
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3	chr16	NT_010604	AC009086	29824786	3	40545	0	0	40545
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3	chr16	NT_010441	AC092119	21966973	3	14944	0	0	14944
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3	chr16	NT_010604	AC133555	29664926	3	97843	0	0	97843
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC003007	21326547		23317	0	0	23317
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC008864	21470275		132842	2917	2805	138564
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC009124	29824786		64107	0	0	64107
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC022147	29824786		20883	1763	17287	39933
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC023463	29824786		70260	13444	20193	103897
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC069176	29824786		39275	2732	56642	98649
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC092285	21966973		12834	0	758	13592
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC106826	21966973		17040	0	0	17040
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC133543	21966973		10449	1512	12631	24592
S/G/Y/R/B/O	NT_010441	AC008740	21326547	3			AC133567	29664926		37486	0	0	37486
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3	chr16	NT_010441	AC092719	21655604	3	0	0	0	0
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3	chr16	NT_010604	AC133555	29664926	3	12662	0	0	12662
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC009124	21326547		119058	0	0	119058
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC017077	21326547		16018	0	1429	17447
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC022147	21326547		30872	6188	49290	86350
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC023463	21326547		15230	1535	0	16765
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC068150	29611695		32439	8149	14036	54624
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC069176	29611695		43546	0	643	44189
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC092285	29611695		36045	0	5073	41118
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC133559	29664926		30071	5032	13948	49051
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC133562	29664926		54246	0	0	54246
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AC133567	29664926		34765	0	0	34765
S/G/Y/R/B/O	NT_010441	AC005632	21470275	3			AL450123	30588019		13494	0	4047	17541
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3	chr16	NT_010441	AC092375	21800251	3	6444	0	0	6444
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AC017077	22609854		32719	0	10746	43465
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AC019092	22609854		30460	0	2579	33039
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AC020759	22609854		26307	0	28420	54727
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AC106826	21800251		41842	0	0	41842
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AC133543	21800251		14175	7256	13381	34812
S/G/Y/R/B/O	NT_010441	AC092719	21655604	3			AF001549	21800251		115975	0	0	115975
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3	chr16	NT_010441	AC092119	21966973	3	79499	0	0	79499
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC008864	21800251		23977	2903	0	26880
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC017077	21800251		43503	0	41765	85268
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC019092	21800251		11155	4571	5834	21560
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC022147	21800251		25687	0	22302	47989
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC023463	21800251		28264	2077	18498	48839
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC068150	21800251		39636	10236	23396	73268
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC069176	21800251		61336	0	16702	78038
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC092285	19852720		53818	2576	16024	72418
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC106826	21655604		17041	0	0	17041
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC133543	21655604		10861	1511	16491	28863
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AC133567	21655604		56228	0	0	56228
S/G/Y/R/B/O	NT_010441	AC092375	21800251	3			AL450123	21655604		10064	7271	9562	26897
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3	chr16	NT_010441	AC009019	22037800	3	21851	0	0	21851
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3	chr16	NT_010441	AC008740	21326547	3	14944	0	0	14944
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3	chr16	NT_010604	AC133555	29664926	3	14893	0	0	14893
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC017077	22037800		16077	0	1443	17520
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC023463	22037800		15199	0	2578	17777
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC068150	29611695		69449	12299	22182	103930
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC069176	29611695		42801	0	644	43445
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC092285	29611695		78081	2579	16004	96664
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC133562	29664926		53047	0	0	53047
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AC133567	29664926		33900	0	0	33900
S/G/Y/R/B/O	NT_010441	AC092119	21966973	3			AL450123	30588019		10067	2266	5123	17456
S/G/Y/R/B/O	NT_010441	AC009019	22037800	3	chr16	NT_010441	AC009034	22217586	3	61385	0	0	61385
S/G/Y/R/B/O	NT_010441	AC009019	22037800	3			AC021336	22217586		28653	0	10768	39421
S/G/Y/R/B/O	NT_010441	AC009034	22217586	3	chr16	NT_010441	AC092338	22322618	3	19842	0	0	19842
S/G/Y/R/B/O	NT_010441	AC009034	22217586	3			AC021336	22037800		67012	6532	36176	109720
S/G/Y/R/B/O	NT_010441	AC009034	22217586	3			AC122704	22322618		13146	27861	30627	71634
S/G/Y/R/B/O	NT_010441	AC092338	22322618	3	chr16	NT_010441	AC106788	22445899	3	6654	0	0	6654
S/G/Y/R/B/O	NT_010441	AC092338	22322618	3			AC021336	22217586		29691	0	2257	31948
S/G/Y/R/B/O	NT_010441	AC092338	22322618	3			AC133553	22445899		30488	0	92773	123261
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3	chr16	NT_010441	AC009021	22609854	3	0	0	4915	4915
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC008864	22445899		24027	2918	0	26945
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC017077	22609854		29353	2015	41213	72581
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC019092	22609854		34711	4565	7242	46518
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC022147	22609854		20876	0	26809	47685
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC023463	22609854		38145	4893	5008	48046
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC068150	22609854		32441	8198	14003	54642
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC069176	22609854		62007	0	14114	76121
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC092285	19852720		36057	2570	14627	53254
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC106826	22322618		86805	0	0	86805
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC133543	22322618		22888	12316	33251	68455
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC133553	22322618		24465	0	36188	60653
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC133562	22322618		102497	0	36384	138881
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AC133567	22322618		119651	0	0	119651
S/G/Y/R/B/O	NT_010441	AC106788	22445899	3			AL450123	22322618		13535	7127	4226	24888
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3	chr16	NT_010441	AC003661	22780980	3	4886	0	0	4886
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3			AC009150	22780980		111857	0	0	111857
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3			AC019092	22780980		62206	9237	50366	121809
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3			AC106826	22445899		42793	0	42566	85359
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3			AC133543	22445899		18038	0	50480	68518
S/G/Y/R/B/O	NT_010441	AC009021	22609854	3			AC133567	22445899		47166	0	42287	89453
S/G/Y/R/B/O	NT_010441	AC003661	22780980	3	chr16	NT_010441	AC130450	22882785	3	10523	0	0	10523
S/G/Y/R/B/O	NT_010441	AC003661	22780980	3			AC002287	22445899		10523	0	0	10523
S/G/Y/R/B/O	NT_010441	AC003661	22780980	3			AC009150	22609854		85310	0	0	85310
S/G/Y/R/B/O	NT_010441	AC003661	22780980	3			AC027102	22609854		41680	2422	1435	45537
S/G/Y/R/B/O	NT_010441	AC003661	22780980	3			AC130466	27193624		106078	0	0	106078
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC002287	27193624		87666	0	0	87666
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC002287	27193624		87666	0	0	87666
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC027102	22780980		90295	15131	3151	108577
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC027102	22780980		90295	15131	3151	108577
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC130466	22780980		10517	0	0	10517
S/G/Y/R/B/O	NT_010441	AC130450	22882785	3			AC130466	22780980		10517	0	0	10517