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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 | chr16 | NT_024773 | AC092133 | 35471291 | 3 | 131217 | 0 | 0 | 131217 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 | chr16 | NT_024773 | AC108131 | 35598330 | 3 | 70065 | 0 | 0 | 70065 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 | chr16 | NT_024773 | AC108131 | 35598330 | 3 | 70065 | 0 | 0 | 70065 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 | chr16 | NT_037897 | AC135781 | 74054976 | 1 | 92228 | 0 | 49901 | 142129 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 | chr16 | NT_037897 | AC135781 | 74054976 | 1 | 92228 | 0 | 49901 | 142129 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 |   |   | AC133558 | 35598330 | | 22021 | 0 | 6083 | 28104 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 |   |   | AC133558 | 35598330 | | 22021 | 0 | 6083 | 28104 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 |   |   | AC135775 | 35598330 | | 145949 | 0 | 0 | 145949 |
S/G/Y/R/B/O |
NT_024773 | AC135776 | 35434672 | 3 |   |   | AC135775 | 35598330 | | 145949 | 0 | 0 | 145949 |
S/G/Y/R/B/O |
NT_024773 | AC092133 | 35471291 | 3 | chr16 | NT_024773 | AC108131 | 35598330 | 3 | 94364 | 0 | 0 | 94364 |
S/G/Y/R/B/O |
NT_024773 | AC092133 | 35471291 | 3 | chr16 | NT_037897 | AC135781 | 74054976 | 1 | 106088 | 0 | 49829 | 155917 |
S/G/Y/R/B/O |
NT_024773 | AC092133 | 35471291 | 3 |   |   | AC133558 | 35598330 | | 22053 | 0 | 6083 | 28136 |
S/G/Y/R/B/O |
NT_024773 | AC092133 | 35471291 | 3 |   |   | AC135775 | 35598330 | | 116176 | 0 | 0 | 116176 |
S/G/Y/R/B/O |
NT_024773 | AC108131 | 35598330 | 3 | chr16 | NT_024773 | AC023824 | 35685075 | 3 | 65720 | 0 | 0 | 65720 |
S/G/Y/R/B/O |
NT_024773 | AC108131 | 35598330 | 3 | chr16 | NT_024773 | AC135776 | 35434672 | 3 | 70065 | 0 | 0 | 70065 |
S/G/Y/R/B/O |
NT_024773 | AC108131 | 35598330 | 3 | chr16 | NT_024773 | AC135776 | 35434672 | 3 | 70065 | 0 | 0 | 70065 |
S/G/Y/R/B/O |
NT_024773 | AC108131 | 35598330 | 3 | chr16 | NT_037897 | AC135781 | 74054976 | 1 | 103270 | 0 | 39007 | 142277 |
S/G/Y/R/B/O |
NT_024773 | AC108131 | 35598330 | 3 |   |   | AC135775 | 35471291 | | 54453 | 0 | 0 | 54453 |
S/G/Y/R/B/O |
NT_024773 | AC023824 | 35685075 | 3 | chr16 | NT_024773 | AC007353 | 35693179 | 3 | 70603 | 0 | 0 | 70603 |
S/G/Y/R/B/O |
NT_024773 | AC023824 | 35685075 | 3 | chr16 | NT_037897 | AC135781 | 74054976 | 1 | 17221 | 0 | 38960 | 56181 |
S/G/Y/R/B/O |
NT_024773 | AC007353 | 35693179 | 3 | chr16 | NT_024773 | AC018558 | 35894240 | 3 | 14113 | 0 | 0 | 14113 |
S/G/Y/R/B/O |
NT_024773 | AC007353 | 35693179 | 3 |   |   | AC026186 | 35685075 | | 31335 | 9537 | 53149 | 94021 |
S/G/Y/R/B/O |
NT_024773 | AC018558 | 35894240 | 3 | chr16 | NT_024773 | AC092325 | 36031171 | 3 | 0 | 0 | 5812 | 5812 |
S/G/Y/R/B/O |
NT_024773 | AC092325 | 36031171 | 3 | chr16 | NT_024773 | AC106785 | 36170807 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024773 | AC106785 | 36170807 | 3 | chr16 | NT_024773 | AC116553 | 36257845 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024773 | AC106785 | 36170807 | 3 |   |   | AC026644 | 35894240 | | 36185 | 0 | 0 | 36185 |
S/G/Y/R/B/O |
NT_024773 | AC106785 | 36170807 | 3 |   |   | AC026644 | 35894240 | | 36185 | 0 | 0 | 36185 |
S/G/Y/R/B/O |
NT_024773 | AC116553 | 36257845 | 3 | chr16 | NT_024773 | AC109490 | 36431537 | 1 | 0 | 0 | 37417 | 37417 |
S/G/Y/R/B/O |
NT_024773 | AC116553 | 36257845 | 3 |   |   | AC026644 | 35894240 | | 49199 | 0 | 3776 | 52975 |
S/G/Y/R/B/O |
NT_024773 | AC109490 | 36431537 | 1 |   |   |   |   |   |   |   |   |   |
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