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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037893 | AC002042 | 34844921 | 1 | 33643 | 0 | 6211 | 39854 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037893 | AC009091 | 34954749 | 2 | 20698 | 0 | 2937 | 23635 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037893 | AC020761 | 34966120 | 1 | 30444 | 2640 | 9355 | 42439 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037892 | AC114938 | 33679884 | 3 | 16582 | 0 | 1175 | 17757 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037892 | AC114938 | 33679884 | 3 | 16582 | 0 | 1175 | 17757 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_024812 | AC133485 | 32668460 | 3 | 16522 | 0 | 0 | 16522 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037892 | AC133920 | 33962215 | 1 | 12873 | 1494 | 27064 | 41431 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_037892 | AC136425 | 33507196 | 2 | 16588 | 0 | 1176 | 17764 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 | chr16 | NT_035382 | U91320 | 33281697 | 3 | 12032 | 0 | 0 | 12032 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC007908 | 33076718 | | 16533 | 0 | 0 | 16533 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC133548 | 33005418 | | 20695 | 0 | 11154 | 31849 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC133564 | 33005418 | | 16535 | 0 | 6364 | 22899 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC133569 | 33005418 | | 16580 | 0 | 4885 | 21465 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC136612 | 33507196 | | 15345 | 0 | 0 | 15345 |
S/G/Y/R/B/O |
NT_037893 | AC133551 | 34834934 | 1 |   |   | AC136620 | 34036092 | | 16588 | 0 | 1176 | 17764 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 | chr16 | NT_037893 | AC009091 | 34954749 | 2 | 40516 | 0 | 0 | 40516 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 | chr16 | NT_037893 | AC020761 | 34966120 | 1 | 33184 | 0 | 13028 | 46212 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 | chr16 | NT_024779 | AC092342 | 34150392 | 3 | 30540 | 0 | 0 | 30540 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 | chr16 | NT_037892 | AC133920 | 33962215 | 1 | 18535 | 3364 | 48162 | 70061 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 | chr16 | NT_037892 | AC136614 | 34036092 | 1 | 15927 | 0 | 35931 | 51858 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 |   |   | AC022264 | 34966120 | | 29254 | 0 | 1137 | 30391 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 |   |   | AC024036 | 34966120 | | 20047 | 4906 | 36330 | 61283 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 |   |   | AC127536 | 85020600 | | 36332 | 0 | 0 | 36332 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 |   |   | AC127536 | 85020600 | | 36332 | 0 | 0 | 36332 |
S/G/Y/R/B/O |
NT_037893 | AC002042 | 34844921 | 1 |   |   | AC133548 | 85020600 | | 40446 | 0 | 0 | 40446 |
S/G/Y/R/B/O |
NT_037893 | AC009091 | 34954749 | 2 | chr16 | NT_037893 | AC020761 | 34966120 | 1 | 0 | 0 | 11854 | 11854 |
S/G/Y/R/B/O |
NT_037893 | AC009091 | 34954749 | 2 | chr16 | NT_037893 | AC133551 | 34834934 | 1 | 20698 | 0 | 2937 | 23635 |
S/G/Y/R/B/O |
NT_037893 | AC009091 | 34954749 | 2 | chr16 | NT_037893 | AC136433 | 35107995 | 1 | 44149 | 0 | 845 | 44994 |
S/G/Y/R/B/O |
NT_037893 | AC009091 | 34954749 | 2 | chr16 | NT_037892 | AC136614 | 34036092 | 1 | 73887 | 2953 | 24003 | 100843 |
S/G/Y/R/B/O |
NT_037893 | AC009091 | 34954749 | 2 |   |   | AC134305 | 33962215 | | 72242 | 0 | 0 | 72242 |
S/G/Y/R/B/O |
NT_037893 | AC020761 | 34966120 | 1 | chr16 | NT_037893 | AC136433 | 35107995 | 1 | 0 | 0 | 845 | 845 |
S/G/Y/R/B/O |
NT_037893 | AC020761 | 34966120 | 1 | chr16 | NT_037893 | AC002042 | 34844921 | 1 | 33184 | 0 | 13028 | 46212 |
S/G/Y/R/B/O |
NT_037893 | AC020761 | 34966120 | 1 | chr16 | NT_037893 | AC133551 | 34834934 | 1 | 30444 | 2640 | 9355 | 42439 |
S/G/Y/R/B/O |
NT_037893 | AC020761 | 34966120 | 1 |   |   | AC133548 | 33005418 | | 33609 | 0 | 12133 | 45742 |
S/G/Y/R/B/O |
NT_037893 | AC020761 | 34966120 | 1 |   |   | AC133564 | 34834934 | | 28741 | 0 | 14230 | 42971 |
S/G/Y/R/B/O |
NT_037893 | AC136433 | 35107995 | 1 | chr16 | NT_037893 | AC136625 | 35148041 | 1 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_037893 | AC136433 | 35107995 | 1 | chr16 | NT_037893 | AC009091 | 34954749 | 2 | 44149 | 0 | 845 | 44994 |
S/G/Y/R/B/O |
NT_037893 | AC136433 | 35107995 | 1 | chr16 | NT_037892 | AC133916 | 33796124 | 3 | 78110 | 0 | 0 | 78110 |
S/G/Y/R/B/O |
NT_037893 | AC136433 | 35107995 | 1 |   |   | AC027509 | 34966120 | | 19627 | 0 | 33014 | 52641 |
S/G/Y/R/B/O |
NT_037893 | AC136433 | 35107995 | 1 |   |   | AC134305 | 33962215 | | 78156 | 0 | 0 | 78156 |
S/G/Y/R/B/O |
NT_037893 | AC136625 | 35148041 | 1 |   |   |   |   |   |   |   |   |   |
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