Chromosome 3 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_037561
NT_005927
NT_028123
NT_006044
NT_037562
NT_022517
NT_005762
NT_037564
NT_005646
NT_034532
NT_005580
NT_034533
NT_005498
NT_037565
NT_005825
NT_022567
NT_037566
NT_034535
NT_022439
NT_006014
NT_033032
NT_037567
NT_005986
NT_033038
NT_034652
NT_037568
NT_005787
NT_005607
NT_037569
NT_005999
NT_022473
NT_022423
NT_037570
NT_037571
NT_005526
NT_037572
NT_022446
NT_005882
NT_005684
NT_022459
NT_006031
NT_022419
NT_022642
NT_022435
NT_022497
NT_037573
NT_022475
NT_033050
NT_033041
NT_037574
NT_005863
NT_022454
NT_037575
NT_025670
NT_022434
NT_005795
NT_015150
NT_022445
NT_005994
NT_005513
NT_037577
NT_037578
NT_005543
NT_005588
NT_037579
NT_037580
NT_022513
NT_033014
NT_006025
NT_005823
NT_037581
NT_022393
NT_005824
NT_037582
NT_037583
NT_034552
NT_025663
NT_034554
NT_005567
NT_025664
NT_005832
NT_019358
NT_005775
NT_005612
NT_022463
NT_022594
NT_022421
NT_022518
NT_005638
NT_034563
NT_025667
NT_022509
NT_034565
NT_022396
NT_022676
NT_029253
NT_037584
NT_005962
NT_033013
NT_029928
NT_037585
NT_005535
NT_022508
NT_037586
NT_005498
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC073219
38041957
1
chr3
NT_005498
AC123903
38102083
3
0
2214
1182
3396
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC073219
38041957
1
chr3
NT_005498
AC092053
38393298
3
34397
0
4732
39129
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC123903
38102083
3
chr3
NT_005498
AC116038
38215454
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC116038
38215454
3
chr3
NT_005498
AC092053
38393298
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC092053
38393298
3
chr3
NT_005498
AC104850
38569872
3
80351
0
0
80351
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC092053
38393298
3
chr3
NT_005498
AC073219
38041957
1
34397
0
4732
39129
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC104850
38569872
3
chr3
NT_005498
AC099332
38663093
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC099332
38663093
3
chr3
NT_005498
AC092058
38738398
3
42159
0
0
42159
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC092058
38738398
3
chr3
NT_005498
AC104444
38896961
3
75250
0
0
75250
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC104444
38896961
3
chr3
NT_005498
AC104163
38982593
3
57229
0
0
57229
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC104163
38982593
3
chr3
NT_005498
AC104188
39094681
3
73864
0
0
73864
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC104188
39094681
3
chr3
NT_005498
AC104185
39184991
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC104185
39184991
3
chr3
NT_005498
AC110718
39275686
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC110718
39275686
3
chr3
NT_005498
AC099557
39328113
3
17310
0
0
17310
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC099557
39328113
3
 
 
 
 
 
 
 
 
 
S
/
G
/
Y
/
R
/
B
/
O
NT_005498
AC099557
39328113
3
 
 
AC099331
39328113
134094
0
0
134094