Chromosome 3 - Clone Overlaps - Single Contig
Description of this page
Main Reports Page
Main Assembly Page
Main Overlap Page
Whole Chromosome
Single Contigs
Line color code:
White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly
NT_037561
NT_005927
NT_028123
NT_006044
NT_037562
NT_022517
NT_005762
NT_037564
NT_005646
NT_034532
NT_005580
NT_034533
NT_005498
NT_037565
NT_005825
NT_022567
NT_037566
NT_034535
NT_022439
NT_006014
NT_033032
NT_037567
NT_005986
NT_033038
NT_034652
NT_037568
NT_005787
NT_005607
NT_037569
NT_005999
NT_022473
NT_022423
NT_037570
NT_037571
NT_005526
NT_037572
NT_022446
NT_005882
NT_005684
NT_022459
NT_006031
NT_022419
NT_022642
NT_022435
NT_022497
NT_037573
NT_022475
NT_033050
NT_033041
NT_037574
NT_005863
NT_022454
NT_037575
NT_025670
NT_022434
NT_005795
NT_015150
NT_022445
NT_005994
NT_005513
NT_037577
NT_037578
NT_005543
NT_005588
NT_037579
NT_037580
NT_022513
NT_033014
NT_006025
NT_005823
NT_037581
NT_022393
NT_005824
NT_037582
NT_037583
NT_034552
NT_025663
NT_034554
NT_005567
NT_025664
NT_005832
NT_019358
NT_005775
NT_005612
NT_022463
NT_022594
NT_022421
NT_022518
NT_005638
NT_034563
NT_025667
NT_022509
NT_034565
NT_022396
NT_022676
NT_029253
NT_037584
NT_005962
NT_033013
NT_029928
NT_037585
NT_005535
NT_022508
NT_037586
NT_005994
Links
Contig1
Acc1
Start1
Phs
Chr2
Contig2
Acc2
Start2
Phs
Strong Overlap
Medium Overlap
Weak Overlap
Total Overlap
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026762
116924028
3
chr3
NT_005994
AC127902
116976808
3
0
1993
0
1993
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC127902
116976808
3
chr3
NT_005994
AC092691
116986049
3
0
2000
0
2000
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092691
116986049
3
chr3
NT_005994
AC128684
117154261
3
2004
0
0
2004
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC128684
117154261
3
chr3
NT_005994
AC020650
117232564
3
2005
0
0
2005
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC020650
117232564
3
chr3
NT_005994
AC026343
117304559
3
0
1973
0
1973
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026343
117304559
3
chr3
NT_005994
AC023793
117471200
3
0
0
63244
63244
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC023793
117471200
3
chr3
NT_005994
AC117412
117558761
3
0
2003
0
2003
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC117412
117558761
3
chr3
NT_005994
AC072041
117609739
3
0
0
1690
1690
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC072041
117609739
3
chr3
NT_005994
AC068633
117719550
3
0
1997
0
1997
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC072041
117609739
3
 
 
AC026344
117609739
40723
0
9571
50294
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC068633
117719550
3
chr3
NT_005994
AC092743
117879285
3
0
1949
0
1949
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC068633
117719550
3
 
 
AC016918
117558761
78172
0
0
78172
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC068633
117719550
3
 
 
AC092772
117879285
43362
0
0
43362
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092743
117879285
3
chr3
NT_005994
AC026360
117947729
3
2036
0
0
2036
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026360
117947729
3
chr3
NT_005994
AC026330
118022973
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026360
117947729
3
 
 
AC092772
117879285
60986
0
0
60986
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026330
118022973
3
chr3
NT_005994
AC068984
118210978
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC026330
118022973
3
 
 
AC005827
117879285
94186
0
0
94186
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC068984
118210978
3
chr3
NT_005994
AC007023
118260028
3
2984
0
0
2984
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC007023
118260028
3
chr3
NT_005994
AC012032
118405498
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC012032
118405498
3
chr3
NT_005994
AC083800
118433287
3
0
0
1660
1660
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC083800
118433287
3
chr3
NT_005994
AC092981
118612683
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092981
118612683
3
chr3
NT_005994
AC074271
118771298
3
2004
0
0
2004
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092981
118612683
3
 
 
AC012332
118405498
101713
0
774
102487
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092981
118612683
3
 
 
AC017034
118405498
104072
0
0
104072
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC074271
118771298
3
chr3
NT_005994
AC073352
118830475
3
2004
0
0
2004
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC074271
118771298
3
 
 
AC012332
118771298
61449
1093
0
62542
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC073352
118830475
3
chr3
NT_005994
AC023494
118990213
3
0
1998
0
1998
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC073352
118830475
3
 
 
AC012332
118612683
13128
0
0
13128
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC073352
118830475
3
 
 
AC069519
118990213
84768
5131
4634
94533
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC023494
118990213
3
chr3
NT_005994
AC117466
119046175
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC023494
118990213
3
 
 
AC069519
118771298
22143
2513
9788
34444
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC117466
119046175
3
chr3
NT_005994
AC069444
119074602
3
2001
0
0
2001
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC069444
119074602
3
chr3
NT_005994
AC078856
119237694
3
0
0
0
0
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC078856
119237694
3
chr3
NT_005994
AC092910
119351219
3
56817
0
0
56817
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092910
119351219
3
chr3
NT_005994
AC024217
119472712
3
0
2062
0
2062
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC092910
119351219
3
 
 
AC021885
119351219
63158
0
37371
100529
S
/
G
/
Y
/
R
/
B
/
O
NT_005994
AC024217
119472712
3