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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005034
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005034AC0936982112487881        
S/G/Y/R/B/O NT_005034AC0189612112641881UT7691  2206.741 AC018961
S/G/Y/R/B/O NT_005034AC0092262114100903AFM266VC52210.902204.531 AC009226
S/G/Y/R/B/O NT_005034AC0092262114132733AFMC009WH12212.702205.061 AC009226
S/G/Y/R/B/O NT_005034AC0092982114311843        
S/G/Y/R/B/O NT_005034AC0797672115962261        
S/G/Y/R/B/O NT_005034AC0094092116143881        
S/G/Y/R/B/O NT_005034AC0967722117931763AFMA351ZD12211.402205.061 AC096772
S/G/Y/R/B/O NT_005034AC0839002118643853AFMA246XC52211.502205.061AC022576, AC022576, AC083900
S/G/Y/R/B/O NT_005034AC0839002119408823AFM210YC11  2206.131AC022576, AC022576, AC083900
S/G/Y/R/B/O NT_005034AC0839002119408823AFM210YC112209.80  1AC022576, AC022576, AC083900
S/G/Y/R/B/O NT_005034AC0225762120774291        
S/G/Y/R/B/O NT_005034M193642121284973        
S/G/Y/R/B/O NT_005034AC0166972121450643        
S/G/Y/R/B/O NT_005034AC0123622123085533        
S/G/Y/R/B/O NT_005034AC0191852124631713        
S/G/Y/R/B/O NT_005034AC0791472126335233        
S/G/Y/R/B/O NT_005034AC0679442127159473        
S/G/Y/R/B/O NT_005034AC1098242128220461        
S/G/Y/R/B/O NT_005034AC0793082129038473        
S/G/Y/R/B/O NT_005034AC0692052129921233AFM157XG92212.102205.591AC069063, AC079308, AC069063, AC069205, AC079308
S/G/Y/R/B/O NT_005034AC0134092130442683        
S/G/Y/R/B/O NT_005034AC0167432132377463        
S/G/Y/R/B/O NT_005034AC0191062133860203AFMB297YA92211.402205.061 AC019106
S/G/Y/R/B/O NT_005034AC1080722135855263GATA52C06  2206.741 AC108072
S/G/Y/R/B/O NT_005034AC0798332136822383GATA29A06  2206.131 AC079833
S/G/Y/R/B/O NT_005034AC0063852136862923        
S/G/Y/R/B/O NT_005034AC0064642139414763AFM262XE5  2206.131 AC006464
S/G/Y/R/B/O NT_005034AC0064642139414763AFM262XE52209.80  1 AC006464
S/G/Y/R/B/O NT_005034AC0070382139593083        
S/G/Y/R/B/O NT_005034AC0069942140831013UT430  2204.531 AC006994
S/G/Y/R/B/O NT_005034AC0975252142500423        
S/G/Y/R/B/O NT_005034AC0211502143443883AFM212ZE92212.602206.132 AC021150, AC114281
S/G/Y/R/B/O NT_005034AC0079702143873043        
S/G/Y/R/B/O NT_005034AC0081722145259943        
S/G/Y/R/B/O NT_005034AC0079682147944543207YE11  2206.131 AC007968
S/G/Y/R/B/O NT_005034AC0840132148536093        
S/G/Y/R/B/O NT_005034AC0123562149572133        
S/G/Y/R/B/O NT_005034AC0124912150677403        
S/G/Y/R/B/O NT_005034AC0134042152722443        
S/G/Y/R/B/O NT_005034AC0120692154513291AFM311VG92213.502206.741 AC012069, AC069186
S/G/Y/R/B/O NT_005034AC1082202154676663        
S/G/Y/R/B/O NT_005034AC0689702155096373