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  Chromosome 2 - Genetic Maps - Single Contig
 

Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022135
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC0687441262077481AFM032XG52145.802141.621 AC068744, AC098800
S/G/Y/R/B/O NT_022135AC0116381261821571        
S/G/Y/R/B/O NT_022135AC0219011261889991        
S/G/Y/R/B/O NT_022135AP0013691262146821        
S/G/Y/R/B/O NT_022135AC0843671262245981        
S/G/Y/R/B/O NT_022135AC1054221263188543        
S/G/Y/R/B/O NT_022135AC0167211263605093        
S/G/Y/R/B/O NT_022135AC0926331265468423        
S/G/Y/R/B/O NT_022135AC1122481266807053        
S/G/Y/R/B/O NT_022135AC0794521267177663        
S/G/Y/R/B/O NT_022135AC1089401268943391        
S/G/Y/R/B/O NT_022135AC1044051269404013        
S/G/Y/R/B/O NT_022135AC0797731270365333AFMA297WC12147.002142.831 AC079773
S/G/Y/R/B/O NT_022135AC0109741270720713        
S/G/Y/R/B/O NT_022135AC0169091272171953        
S/G/Y/R/B/O NT_022135AC0124891273725303        
S/G/Y/R/B/O NT_022135AC0117551275193883AFM205XD42145.702141.621 AC011755, AC068691
S/G/Y/R/B/O NT_022135AC0108901276720163        
S/G/Y/R/B/O NT_022135AC0119961278907893UT1358  2142.831 AC011996
S/G/Y/R/B/O NT_022135AC0112431279843293AFM052XF82147.102142.831 AC011243
S/G/Y/R/B/O NT_022135AC0188771280392753        
S/G/Y/R/B/O NT_022135AC1072091281208311        
S/G/Y/R/B/O NT_022135AC0167591283247223AFM220XC92148.502144.521 AC016759
S/G/Y/R/B/O NT_022135AC0926231283691983        
S/G/Y/R/B/O NT_022135AC1156251285395421        
S/G/Y/R/B/O NT_022135AC0924551285580251        
S/G/Y/R/B/O NT_022135AC0410081285704271        
S/G/Y/R/B/O NT_022135AC0169061286106463        
S/G/Y/R/B/O NT_022135AC0132761287936913        
S/G/Y/R/B/O NT_022135AC0137181288450853        
S/G/Y/R/B/O NT_022135AC0938921290209403        
S/G/Y/R/B/O NT_022135AC1106201291300181        
S/G/Y/R/B/O NT_022135AC0167251292681753        
S/G/Y/R/B/O NT_022135AC0206021294323553        
S/G/Y/R/B/O NT_022135AC0170311295975823        
S/G/Y/R/B/O NT_022135AC0124501297474853        
S/G/Y/R/B/O NT_022135AC0648501299291803        
S/G/Y/R/B/O NT_022135AC0167421299460783        
S/G/Y/R/B/O NT_022135AC0118931301291513GATA4D07  2145.081 AC011893, AC012551
S/G/Y/R/B/O NT_022135AC0118931301291893UT1307  2069.501 AC012551
S/G/Y/R/B/O NT_022135AC0119991303041853        
S/G/Y/R/B/O NT_022135AC0933911303605303        
S/G/Y/R/B/O NT_022135AC0684921305613853AFMA224XB92150.602146.151 AC068492
S/G/Y/R/B/O NT_022135AC1122551306503061        
S/G/Y/R/B/O NT_022135AC0925921307831513        
S/G/Y/R/B/O NT_022135AC0101461309321333GATA8H05  2147.401 AC010146
S/G/Y/R/B/O NT_022135AC0927861310436923        
S/G/Y/R/B/O NT_022135AC0101001312094793AFM248ZA92150.502146.151 AC010100, AC079808
S/G/Y/R/B/O NT_022135AC0101001312346743AFMA071TF92150.602146.151 AC010100
S/G/Y/R/B/O NT_022135AC0108731312401713        


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC0112311314344753AFMA083XH52152.102147.401 AC011231, AC027600
S/G/Y/R/B/O NT_022135AC0120001315395783        
S/G/Y/R/B/O NT_022135AC0190671317873353AFMA058YE12152.002147.401 AC019067
S/G/Y/R/B/O NT_022135AC0170821319927503AFMB316ZB52152.002147.401 AC017082
S/G/Y/R/B/O NT_022135AC0166791320835613        
S/G/Y/R/B/O NT_022135AC0206011321849143UT431  2144.521 AC020601
S/G/Y/R/B/O NT_022135AC0193041323729371        
S/G/Y/R/B/O NT_022135AC0936741323729533        
S/G/Y/R/B/O NT_022135AC0693941324661413        
S/G/Y/R/B/O NT_022135AC0975231326394933        
S/G/Y/R/B/O NT_022135AC0977211327462043        
S/G/Y/R/B/O NT_022135AC1147631328886971        
S/G/Y/R/B/O NT_022135AC0788511330800023AFM205TG12154.402149.891 AC068090, AC068626, AC078851
S/G/Y/R/B/O NT_022135AC0921661330932073        
S/G/Y/R/B/O NT_022135AC0124971331275083        
S/G/Y/R/B/O NT_022135AC0167101333376143        
S/G/Y/R/B/O NT_022135AC0620211334314503        
S/G/Y/R/B/O NT_022135AC0132651335298993AFM362TD92154.802150.961 AC011174
S/G/Y/R/B/O NT_022135AC0123521337204643GATA26B04  2149.891 AC012352
S/G/Y/R/B/O NT_022135AC1093451338286193        
S/G/Y/R/B/O NT_022135AC0234681338641823        
S/G/Y/R/B/O NT_022135AC0928371340836243AFMB348ZG92154.402149.891 AC092837
S/G/Y/R/B/O NT_022135AC1104211341788763        
S/G/Y/R/B/O NT_022135AC0926201341936723        
S/G/Y/R/B/O NT_022135AC0246971345116653        
S/G/Y/R/B/O NT_022135AC0797621347167503GATA62H05  2125.751 AC079762
S/G/Y/R/B/O NT_022135AC0797621347710703AFM303WC52129.50  1 AC079762
S/G/Y/R/B/O NT_022135AC0797621347710703AFM303WC5  2125.181 AC079762
S/G/Y/R/B/O NT_022135AC0620161349669823GATA6A03  2125.181 AC062016
S/G/Y/R/B/O NT_022135AC0620161349680933UT7798  2124.031 AC062016
S/G/Y/R/B/O NT_022135AC0124491350096093        
S/G/Y/R/B/O NT_022135AC0123651352064013AFM116XE52133.50  1 AC012365
S/G/Y/R/B/O NT_022135AC0123651352064013AFM116XE5  2128.411 AC012365
S/G/Y/R/B/O NT_022135AC0921701353027923        
S/G/Y/R/B/O NT_022135AC0190571353260073        
S/G/Y/R/B/O NT_022135AC0648701355109033        
S/G/Y/R/B/O NT_022135AC0648561356423813        
S/G/Y/R/B/O NT_022135AC0093121357480873        
S/G/Y/R/B/O NT_022135AC0094041359509213        
S/G/Y/R/B/O NT_022135AC0093031360636043        
S/G/Y/R/B/O NT_022135AC0939011363238493GATA167A05  2127.231AC023659, AC023659, AC093901
S/G/Y/R/B/O NT_022135AC1070771364212091        
S/G/Y/R/B/O NT_022135AC0124441365411803        
S/G/Y/R/B/O NT_022135AC0186861367177473        
S/G/Y/R/B/O NT_022135AC0738371369409143        
S/G/Y/R/B/O NT_022135AC0126651369429083        
S/G/Y/R/B/O NT_022135AC0134571370669473        
S/G/Y/R/B/O NT_022135AC0166731372783433UT7080  2132.581 AC016673
S/G/Y/R/B/O NT_022135AC0166731373639473AFMB039ZH12132.60  1 AC016673
S/G/Y/R/B/O NT_022135AC0166731373639473AFMB039ZH1  2128.411 AC016673


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135AC0167361373935213        
S/G/Y/R/B/O NT_022135AC0132751375414053        
S/G/Y/R/B/O NT_022135AC1048171377142273        
S/G/Y/R/B/O NT_022135AC0691541377311573        
S/G/Y/R/B/O NT_022135AC1040611378962893        
S/G/Y/R/B/O NT_022135AC0225941379436621        
S/G/Y/R/B/O NT_022135AC0236591379780181        
S/G/Y/R/B/O NT_022135AC0975321379836251        
S/G/Y/R/B/O NT_022135AC0988261381795713        
S/G/Y/R/B/O NT_022135AC0937871382976883        
S/G/Y/R/B/O NT_022135AJ2393221383826373        
S/G/Y/R/B/O NT_022135AC1035641384919303        
S/G/Y/R/B/O NT_022135AC1046681386711491        
S/G/Y/R/B/O NT_022135AC0166911386975623        
S/G/Y/R/B/O NT_022135AC0798791388792993        
S/G/Y/R/B/O NT_022135AC0123631390978073AFM324VG12133.50  1AC114732, AC114732
S/G/Y/R/B/O NT_022135AC0123631390978073AFM324VG1  2129.221AC114732, AC114732
S/G/Y/R/B/O NT_022135AC1147321391555961AFMC015WB52133.50  1 AC114732
S/G/Y/R/B/O NT_022135AC1147321391555961AFMC015WB5  2129.221 AC114732
S/G/Y/R/B/O NT_022135AC0732571392005833        
S/G/Y/R/B/O NT_022135AC0188661393210713        
S/G/Y/R/B/O NT_022135AC0170331395090273AFMA282VD52133.50  1 AC017033, AC019078
S/G/Y/R/B/O NT_022135AC0170331395090273AFMA282VD5  2129.221 AC017033, AC019078
S/G/Y/R/B/O NT_022135AC0170331396263413AFM191VG112134.10  1 AC017033, AC019078
S/G/Y/R/B/O NT_022135AC0170331396263413AFM191VG11  2129.791 AC017033, AC019078
S/G/Y/R/B/O NT_022135AC0167641396862723AFMB280XG52134.10  1 AC016764
S/G/Y/R/B/O NT_022135AC0167641396862723AFMB280XG5  2129.791 AC016764
S/G/Y/R/B/O NT_022135AC0167641397406883UT5668  2132.581 AC016764
S/G/Y/R/B/O NT_022135AC0167641397761953AFMB053YB92134.10  1 AC016764
S/G/Y/R/B/O NT_022135AC0167641397761953AFMB053YB9  2129.791 AC016764
S/G/Y/R/B/O NT_022135AC0679601398098093        
S/G/Y/R/B/O NT_022135AC0799881398715493        
S/G/Y/R/B/O NT_022135AC0133991399698563        
S/G/Y/R/B/O NT_022135AC0124471401416683        
S/G/Y/R/B/O NT_022135AC0794491403059733        
S/G/Y/R/B/O NT_022135AC0187371403951613AFM281YD52134.60  1 AC016063, AC018737
S/G/Y/R/B/O NT_022135AC0187371403951613AFM281YD5  2130.371 AC016063, AC018737
S/G/Y/R/B/O NT_022135 - AFM016YC52134.60  0  
S/G/Y/R/B/O NT_022135 - UT1914  2137.931 AC023040
S/G/Y/R/B/O NT_022135 - AFM092YE92134.60  0  
S/G/Y/R/B/O NT_022135 - UT5116III  2142.832AL589182, AP000528, AL589182, AP000528
S/G/Y/R/B/O NT_022135 - AFMA305ZC12134.60  1AC011246, AC011246
S/G/Y/R/B/O NT_022135 - MFD19A  2144.521AC010505, AC010505
S/G/Y/R/B/O NT_022135 - AFM289XB12135.70  1AC108219, AC108219
S/G/Y/R/B/O NT_022135 - AFM319TC92136.80  1AC097499, AC097499
S/G/Y/R/B/O NT_022135 - AFM323WC52136.80  1AC009956, AC009956
S/G/Y/R/B/O NT_022135 - AFMB285YH52137.40  1AC068282, AC068282
S/G/Y/R/B/O NT_022135 - AFM249WF12137.40  1AC008275, AC008275
S/G/Y/R/B/O NT_022135 - AFMA286XG12138.30  1 AC013732
S/G/Y/R/B/O NT_022135 - AFM304TA92148.502144.521 AC106815


  NT_022135 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022135 - AFM119XD22154.302149.891AC010740, AC010740
S/G/Y/R/B/O NT_022135 - AFMB281ZB92154.402149.891AC012003, AC012003
S/G/Y/R/B/O NT_022135 - AFMA107WH92154.402149.891AC016706, AC016706
S/G/Y/R/B/O NT_022135 - AFM290YE9  2149.891AC012353, AC012353
S/G/Y/R/B/O NT_022135 - AFM143XE11  2149.891AC079585, AC079585
S/G/Y/R/B/O NT_022135 - AFM290ZB52154.402149.891AC093859, AC093859
S/G/Y/R/B/O NT_022135 - AFMB314ZB92154.402149.891AC108036, AC108036
S/G/Y/R/B/O NT_022135 - AFMA349XF9  2149.891AC010740, AC010740