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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022171
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022171AC092683989842241UT1297  2115.492 AC092683, AC092683
S/G/Y/R/B/O NT_022171AC092683990229981UT1297  2115.492 AC092683, AC092683
S/G/Y/R/B/O NT_022171AC017099992833053AFMA303WF52115.302111.211 AC017099
S/G/Y/R/B/O NT_022171AC016699993204663        
S/G/Y/R/B/O NT_022171AC079337993729463        
S/G/Y/R/B/O NT_022171AC092591995327503        
S/G/Y/R/B/O NT_022171AC018691997686413AFMA153ZG52115.302111.211AC112788, AC018691, AC112788
S/G/Y/R/B/O NT_022171AC112788998167761        
S/G/Y/R/B/O NT_022171AC0926751000005783AFMB355ZG12118.102113.351 AC092675
S/G/Y/R/B/O NT_022171AC0101341000891673AFMA196ZF92118.10  1 AC010134
S/G/Y/R/B/O NT_022171AC0101341000891673AFMA196ZF9  2110.681 AC010134
S/G/Y/R/B/O NT_022171AC0648601002165953        
S/G/Y/R/B/O NT_022171AC1098261003094881        
S/G/Y/R/B/O NT_022171AC0843771003934023        
S/G/Y/R/B/O NT_022171AC0190971005457223        
S/G/Y/R/B/O NT_022171AC1100831007297453        
S/G/Y/R/B/O NT_022171AC0925871007317393        
S/G/Y/R/B/O NT_022171AC0794471007992193        
S/G/Y/R/B/O NT_022171AC0186901009727863        
S/G/Y/R/B/O NT_022171AC0933731012039023        
S/G/Y/R/B/O NT_022171AC0731181012272703        
S/G/Y/R/B/O NT_022171AC0107361013327543        
S/G/Y/R/B/O NT_022171AC1147931015350211        
S/G/Y/R/B/O NT_022171AC0214081015531111        
S/G/Y/R/B/O NT_022171AC0926671015543873        
S/G/Y/R/B/O NT_022171AC1047821017269613        
S/G/Y/R/B/O NT_022171AC0124931018749713        
S/G/Y/R/B/O NT_022171AC0685381022077733AFMA246XE92116.402112.281 AC068538
S/G/Y/R/B/O NT_022171AC0928451022145443        
S/G/Y/R/B/O NT_022171AC0921681022982043        
S/G/Y/R/B/O NT_022171AC1068911024569313        
S/G/Y/R/B/O NT_022171AC0167381024917833        
S/G/Y/R/B/O NT_022171AC0137221026730723        
S/G/Y/R/B/O NT_022171AC0736431028786483        
S/G/Y/R/B/O NT_022171AC0997971029208193        
S/G/Y/R/B/O NT_022171AC0925701029557113        
S/G/Y/R/B/O NT_022171AC0938941031213533        
S/G/Y/R/B/O NT_022171AC0070051033851483AFMB277ZE12118.102114.421 AC007005
S/G/Y/R/B/O NT_022171AC0050351035375593GATA176C01  2114.421 AC005035
S/G/Y/R/B/O NT_022171AC0071651035841263        
S/G/Y/R/B/O NT_022171AC0072711036297393        
S/G/Y/R/B/O NT_022171AC0072481038094933        
S/G/Y/R/B/O NT_022171AC0072781041064943AFM316TG52118.002114.421 AC007278, AC069485
S/G/Y/R/B/O NT_022171AC0072391041731363        
S/G/Y/R/B/O NT_022171AC0072511044720283AFMA048YA92119.602115.491 AC007251
S/G/Y/R/B/O NT_022171AC1080511044930913        
S/G/Y/R/B/O NT_022171AC0739871046109663        
S/G/Y/R/B/O NT_022171AC0108811049208113AFM212ZH102120.802116.261 AC010881
S/G/Y/R/B/O NT_022171AC0115931049342443        
S/G/Y/R/B/O NT_022171AC0925681050643933        


  NT_022171 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022171AC0188801050943273        
S/G/Y/R/B/O NT_022171AC0210151052193523        
S/G/Y/R/B/O NT_022171AC0965481053681493        
S/G/Y/R/B/O NT_022171AC0137271054174903        
S/G/Y/R/B/O NT_022171AC0965541055830123        
S/G/Y/R/B/O NT_022171AC0977231057256953        
S/G/Y/R/B/O NT_022171AC1059261058123143        
S/G/Y/R/B/O NT_022171AC0685351060743463GATA13H01  2115.971 AC068535
S/G/Y/R/B/O NT_022171AC0134021060784613        
S/G/Y/R/B/O NT_022171AC0680571063416193AFM021XF62122.402118.161 AC068057
S/G/Y/R/B/O NT_022171AC0187301064450613ATA19E11  2115.491 AC018730
S/G/Y/R/B/O NT_022171AC0187301064770223AFM172XC32120.302116.021 AC018730
S/G/Y/R/B/O NT_022171AC0108841065116093        
S/G/Y/R/B/O NT_022171AC1070801066485813        
S/G/Y/R/B/O NT_022171AC1046551066604893        
S/G/Y/R/B/O NT_022171AC0123601067541053        
S/G/Y/R/B/O NT_022171AC1080581069530231        
S/G/Y/R/B/O NT_022171AC0682731069936693        
S/G/Y/R/B/O NT_022171AC0188021072938123AFMA338WD52120.802116.551 AC018802
S/G/Y/R/B/O NT_022171AC0976501073033523UT5125  2115.491 AC097650
S/G/Y/R/B/O NT_022171AC0109781073127843        
S/G/Y/R/B/O NT_022171AC0095051074848773AFM262XB52120.802116.551 AC009505
S/G/Y/R/B/O NT_022171AC0095051075119513AFMA046YA92121.902117.621 AC009505
S/G/Y/R/B/O NT_022171AC0188781076132473        
S/G/Y/R/B/O NT_022171AC0921061077820481        
S/G/Y/R/B/O NT_022171AC0156431078358381