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  Chromosome 2 - Genetic Maps - Single Contig
 

Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005367
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC019120316844101        
S/G/Y/R/B/O NT_005367AC021294317185971        
S/G/Y/R/B/O NT_005367AC092569317863113AFM318ZA9254.10  1AC021294, AC021294, AC092569
S/G/Y/R/B/O NT_005367AC092569317863113AFM318ZA9  247.971AC021294, AC021294, AC092569
S/G/Y/R/B/O NT_005367AC110756318760323        
S/G/Y/R/B/O NT_005367AC009301319687653AFMA132ZC9254.10250.652 AC009301, AC107422
S/G/Y/R/B/O NT_005367AC009305320487743AFMB040XF5254.10250.651 AC009305
S/G/Y/R/B/O NT_005367AC015980322600843AFMB313YD5254.10250.651 AC015980
S/G/Y/R/B/O NT_005367AL121657323267043AFM296VG9254.10250.651 AL121657
S/G/Y/R/B/O NT_005367AC016864324291141        
S/G/Y/R/B/O NT_005367AC073255324943123        
S/G/Y/R/B/O NT_005367AC109642325849051        
S/G/Y/R/B/O NT_005367AC104698327486543        
S/G/Y/R/B/O NT_005367AC016907328618243        
S/G/Y/R/B/O NT_005367AC109363330646511        
S/G/Y/R/B/O NT_005367AC010743331216483        
S/G/Y/R/B/O NT_005367AC073168331341801        
S/G/Y/R/B/O NT_005367AC109822391393021GATA86E02  255.511 AC024286, AC040996
S/G/Y/R/B/O NT_005367AC074350332492073UT668  254.961 AC024286
S/G/Y/R/B/O NT_005367AC009414332830893        
S/G/Y/R/B/O NT_005367AC007378334666973AFMA340ZC9259.70256.151 AC007378, AF168681
S/G/Y/R/B/O NT_005367AC007401335978033        
S/G/Y/R/B/O NT_005367AC007363336812593        
S/G/Y/R/B/O NT_005367AC007382339008723AFM163XC11260.70257.221 AC007382
S/G/Y/R/B/O NT_005367AC007404339600343        
S/G/Y/R/B/O NT_005367AC007899341283403        
S/G/Y/R/B/O NT_005367AC007390342463103        
S/G/Y/R/B/O NT_005367AC007391343771273        
S/G/Y/R/B/O NT_005367AC104091345609183        
S/G/Y/R/B/O NT_005367AC006369347636123AFMA130WG1262.70259.361 AC006369
S/G/Y/R/B/O NT_005367AC010878348547533AFM267ZC9262.80259.361 AC010878
S/G/Y/R/B/O NT_005367AC079393349669083        
S/G/Y/R/B/O NT_005367AC016689350950773ATA21D11  259.361 AC011074, AC016689
S/G/Y/R/B/O NT_005367AC009229352559913GATA190D04  259.361 AC009229
S/G/Y/R/B/O NT_005367AC016995353283063AFMA298YG5263.50259.361 AC016995
S/G/Y/R/B/O NT_005367AC093822354693503        
S/G/Y/R/B/O NT_005367AC011247354996393        
S/G/Y/R/B/O NT_005367AC074366357723103AFMC018XG5263.50259.911 AC011152, AC074366
S/G/Y/R/B/O NT_005367AC092833358158111        
S/G/Y/R/B/O NT_005367AC018693358192713        
S/G/Y/R/B/O NT_005367AC019171359833963        
S/G/Y/R/B/O NT_005367AC092672361618413        
S/G/Y/R/B/O NT_005367AC079615362403623        
S/G/Y/R/B/O NT_005367AC007684363187503        
S/G/Y/R/B/O NT_005367AC073403365135981        
S/G/Y/R/B/O NT_005367AL121654365148713AFMA239YD5254.10250.651 AL121654
S/G/Y/R/B/O NT_005367AL121654365824313UT710  7170.941 AL121654
S/G/Y/R/B/O NT_005367AL133247366676673        
S/G/Y/R/B/O NT_005367AL133249368079423        
S/G/Y/R/B/O NT_005367AL121652369926053AFM351TB1254.10250.651 AC022481, AC090853, AL121652


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AL121655371270163        
S/G/Y/R/B/O NT_005367AJ246003372263533        
S/G/Y/R/B/O NT_005367AL121658372947403        
S/G/Y/R/B/O NT_005367AL121653373661733        
S/G/Y/R/B/O NT_005367AL133245374461043        
S/G/Y/R/B/O NT_005367AL133243375580993        
S/G/Y/R/B/O NT_005367AC079837377022783        
S/G/Y/R/B/O NT_005367AL133246377065603        
S/G/Y/R/B/O NT_005367AL121656380625323AFMC011XH5254.10250.651AL133244, AL133244, AC020598, AL121656, AL121656, AL133244, AL133244
S/G/Y/R/B/O NT_005367AL133244380902503        
S/G/Y/R/B/O NT_005367AC019195382837553AFM339YF9254.10250.651 AC019195
S/G/Y/R/B/O NT_005367AC019127384060343        
S/G/Y/R/B/O NT_005367AC020594385091523        
S/G/Y/R/B/O NT_005367AC017050387005623        
S/G/Y/R/B/O NT_005367AC093393387691363        
S/G/Y/R/B/O NT_005367AC069303388875863        
S/G/Y/R/B/O NT_005367AC097506390485541        
S/G/Y/R/B/O NT_005367AC080040390593921        
S/G/Y/R/B/O NT_005367AC073081391642473        
S/G/Y/R/B/O NT_005367AC068546392802483        
S/G/Y/R/B/O NT_005367AC068274393828233GATA22E06  254.961 AC068274
S/G/Y/R/B/O NT_005367AC013407394864963        
S/G/Y/R/B/O NT_005367AC083939396896013AFMA066ZE9258.30254.961 AC080072, AC083939
S/G/Y/R/B/O NT_005367AC110765397700463        
S/G/Y/R/B/O NT_005367AC013442398686563        
S/G/Y/R/B/O NT_005367AC079352399839403        
S/G/Y/R/B/O NT_005367AC019064401401203        
S/G/Y/R/B/O NT_005367AC012593402301693        
S/G/Y/R/B/O NT_005367AC104666403962433        
S/G/Y/R/B/O NT_005367AC073218404161273        
S/G/Y/R/B/O NT_005367AC073874405643903        
S/G/Y/R/B/O NT_005367AC068599405808513        
S/G/Y/R/B/O NT_005367AC011748407230793        
S/G/Y/R/B/O NT_005367AC008170409583103AFM303ZE1258.30254.961 AC008170
S/G/Y/R/B/O NT_005367AC009499410420573        
S/G/Y/R/B/O NT_005367AC105759412476011        
S/G/Y/R/B/O NT_005367AC016735413274443        
S/G/Y/R/B/O NT_005367AC093609414686381        
S/G/Y/R/B/O NT_005367AC010883415218193ATA4F03  264.291AC093609, AC010883, AC093609
S/G/Y/R/B/O NT_005367AC092838418006873MFD325  264.841 AC092838
S/G/Y/R/B/O NT_005367AC104138418131183        
S/G/Y/R/B/O NT_005367AC092615418151123        
S/G/Y/R/B/O NT_005367AC084264420239343AFMB325WF9268.20264.841AC011242, AC011242, AC084264, AC108222
S/G/Y/R/B/O NT_005367AC011242421151713        
S/G/Y/R/B/O NT_005367AC084265422223073AFM077YB7269.00265.391AC108476, AC084265, AC108476, AF351814
S/G/Y/R/B/O NT_005367AC084265422906033AFMB330YF1269.50265.941AC108476, AC108476
S/G/Y/R/B/O NT_005367AC108476423205773        
S/G/Y/R/B/O NT_005367AC087053423345831        
S/G/Y/R/B/O NT_005367AC019129423881223        
S/G/Y/R/B/O NT_005367AC013717425607333        


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC016703427275463        
S/G/Y/R/B/O NT_005367AC019184427591173        
S/G/Y/R/B/O NT_005367AC012455429514893        
S/G/Y/R/B/O NT_005367AC067957430447283        
S/G/Y/R/B/O NT_005367AC012354433171783AFMA153YB1271.40267.581AC093702, AC012354, AC016841, AC062030, AC093702
S/G/Y/R/B/O NT_005367AC093702433792671        
S/G/Y/R/B/O NT_005367AC022097434218211        
S/G/Y/R/B/O NT_005367AC007388434284913        
S/G/Y/R/B/O NT_005367AC104171435804523        
S/G/Y/R/B/O NT_005367AC007246435824463        
S/G/Y/R/B/O NT_005367AC007253439208413AFMA349WD5264.00260.451 AC007253
S/G/Y/R/B/O NT_005367AC007254439554193        
S/G/Y/R/B/O NT_005367AC007377440916363        
S/G/Y/R/B/O NT_005367AC093586442357303        
S/G/Y/R/B/O NT_005367AC007281442377243        
S/G/Y/R/B/O NT_005367AC106048444211773AFMC014YC1264.60261.001AC007877, AC007877, AC106048, Y13034
S/G/Y/R/B/O NT_005367AC007877444216613        
S/G/Y/R/B/O NT_005367AC007317446387393AFM211ZD10264.50261.001 AC007317, AC079189
S/G/Y/R/B/O NT_005367AC020720447655073        
S/G/Y/R/B/O NT_005367AC008270448428493        
S/G/Y/R/B/O NT_005367AC009300450085823        
S/G/Y/R/B/O NT_005367AC009223451183213        
S/G/Y/R/B/O NT_005367AC097536453002653        
S/G/Y/R/B/O NT_005367AC093400454928183        
S/G/Y/R/B/O NT_005367AC010739456045903AFMB351XF1266.00261.661 AC010739, AC078849
S/G/Y/R/B/O NT_005367AC009413457236193AFMA142YF1264.50261.661 AC009413
S/G/Y/R/B/O NT_005367AC104654458611461        
S/G/Y/R/B/O NT_005367AC016722458869543        
S/G/Y/R/B/O NT_005367AC020604460367493        
S/G/Y/R/B/O NT_005367AC018682461670553        
S/G/Y/R/B/O NT_005367AC016912463464603        
S/G/Y/R/B/O NT_005367AC016696464958223AFM200ZE3274.60270.631 AC016696
S/G/Y/R/B/O NT_005367AC017006466294403AFM337YH5273.80270.311 AC017006
S/G/Y/R/B/O NT_005367AC017006467752733AFMA191XA5273.80270.311 AC017006
S/G/Y/R/B/O NT_005367AC017006467822963AFMA073YF1273.80270.311 AC017006
S/G/Y/R/B/O NT_005367AC079892467894403        
S/G/Y/R/B/O NT_005367AC017078469968603AFMA350XH9273.30269.771 AC017078
S/G/Y/R/B/O NT_005367AC115109470009333        
S/G/Y/R/B/O NT_005367AC092600470562893        
S/G/Y/R/B/O NT_005367U51244471076253        
S/G/Y/R/B/O NT_005367AC012072472169413AFMB318XA9273.30269.771 AC012072, AC069416
S/G/Y/R/B/O NT_005367AC008179473042933AFMB310XC5273.30269.771 AC008179
S/G/Y/R/B/O NT_005367AC009236474620273        
S/G/Y/R/B/O NT_005367AC093833476389383        
S/G/Y/R/B/O NT_005367AC083949479067193        
S/G/Y/R/B/O NT_005367AC096668480160153        
S/G/Y/R/B/O NT_005367AC006038482122953AFMB352XG5267.40263.411 AC006038
S/G/Y/R/B/O NT_005367AC025750482729353        
S/G/Y/R/B/O NT_005367AC074375484223021        
S/G/Y/R/B/O NT_005367AC093386485378153        


  NT_005367 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005367AC098824486168573AFM205ZB4267.40264.291 AC098824
S/G/Y/R/B/O NT_005367 - MFD294  249.041 AC107422