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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022222
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022222AC0648591220037861ATA10H07  2131.511 AC064859
S/G/Y/R/B/O NT_022222AC0680431177845063        
S/G/Y/R/B/O NT_022222AC0792991179467233        
S/G/Y/R/B/O NT_022222AC0112461179973453AFMA305ZC12134.602130.371 AC011246
S/G/Y/R/B/O NT_022222AC0112461180569483GGAT1C4  2130.371 AC011246
S/G/Y/R/B/O NT_022222AC0743921181843333        
S/G/Y/R/B/O NT_022222AC0191101182919343        
S/G/Y/R/B/O NT_022222AC0736321183373073GATA135B08  2131.511 AC073632
S/G/Y/R/B/O NT_022222AC0134411183744393        
S/G/Y/R/B/O NT_022222AC1100771185567463        
S/G/Y/R/B/O NT_022222AC0681201185732293        
S/G/Y/R/B/O NT_022222AC0681301186754973        
S/G/Y/R/B/O NT_022222AC0967441188628403        
S/G/Y/R/B/O NT_022222AC0620201188997713        
S/G/Y/R/B/O NT_022222AC0967581190679683        
S/G/Y/R/B/O NT_022222AC0734091191548603        
S/G/Y/R/B/O NT_022222AC1082191193503633AFM289XB12135.702131.511 AC108219
S/G/Y/R/B/O NT_022222AC0794041194038963        
S/G/Y/R/B/O NT_022222AC0926461194763663        
S/G/Y/R/B/O NT_022222AC1148131196764331        
S/G/Y/R/B/O NT_022222AC0099561202003281AFM323WC52136.802132.581 AC009956
S/G/Y/R/B/O NT_022222AC0205471198102633        
S/G/Y/R/B/O NT_022222AC1096371199760023        
S/G/Y/R/B/O NT_022222AC0974991200561833AFM319TC92136.802132.581 AC097499
S/G/Y/R/B/O NT_022222AC1086891201900241        
S/G/Y/R/B/O NT_022222AC0966601202974693UT5135  2132.581AC009956, AC108689, AC009956, AC096660, AC108689
S/G/Y/R/B/O NT_022222AC0082751203858593AFM249WF12137.402132.581 AC008275
S/G/Y/R/B/O NT_022222AC0082751204153083GATA27A12  2132.581 AC008275
S/G/Y/R/B/O NT_022222AC0120011204933743        
S/G/Y/R/B/O NT_022222AC1048421207596313UT7454  2132.581 AC104842
S/G/Y/R/B/O NT_022222AC0988531207913343        
S/G/Y/R/B/O NT_022222AC0191051208845143        
S/G/Y/R/B/O NT_022222AC0921581210530053        
S/G/Y/R/B/O NT_022222AC0191591210570113        
S/G/Y/R/B/O NT_022222AC0977151212180963        
S/G/Y/R/B/O NT_022222AC1046481213597383        
S/G/Y/R/B/O NT_022222AC0109011214718221        
S/G/Y/R/B/O NT_022222AC0743621216087483UT502  2132.581AC010901, AC010901, AC074362
S/G/Y/R/B/O NT_022222AC1057621216937433        
S/G/Y/R/B/O NT_022222AC0791541217680693        
S/G/Y/R/B/O NT_022222AC0739691219507731