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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005322
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005322AC012494817941363        
S/G/Y/R/B/O NT_005322AC073485820229393ATA16D09  299.411 AC073485
S/G/Y/R/B/O NT_005322AC073485820270243GATA71G04  299.412AC019332, AC019332, AC073485
S/G/Y/R/B/O NT_005322AC064872821538413AFM240VH122103.10299.412AC019332, AC019332, AC064872
S/G/Y/R/B/O NT_005322AC092660822421703        
S/G/Y/R/B/O NT_005322AC018887824529733GATA6C12  299.411 AC018887
S/G/Y/R/B/O NT_005322AC069162825823403        
S/G/Y/R/B/O NT_005322AC092604826251463        
S/G/Y/R/B/O NT_005322AC017004826787543UT2096  2100.221 AC017004
S/G/Y/R/B/O NT_005322AC069387828879503AFM268XG52105.502101.022AC011993, AC011993, AC069387
S/G/Y/R/B/O NT_005322AC011754829045463        
S/G/Y/R/B/O NT_005322AC018733830460503        
S/G/Y/R/B/O NT_005322AC010975832702623AFM177XH42106.002101.561 AC010975
S/G/Y/R/B/O NT_005322AC096573833800163        
S/G/Y/R/B/O NT_005322AC096753834750033        
S/G/Y/R/B/O NT_005322AC093322835756233        
S/G/Y/R/B/O NT_005322AC011746835776173        
S/G/Y/R/B/O NT_005322AC016716838506403UT428  2102.621 AC016716
S/G/Y/R/B/O NT_005322AC016716838510643AFMA210XD12107.102102.621 AC016716, AC023348
S/G/Y/R/B/O NT_005322AC016670840127273AFM161YH102107.102102.621 AC016670, AC018534
S/G/Y/R/B/O NT_005322AC104780840971453        
S/G/Y/R/B/O NT_005322AC011741841716463        
S/G/Y/R/B/O NT_005322AC008067843110643        
S/G/Y/R/B/O NT_005322AC012355844621063        
S/G/Y/R/B/O NT_005322AC107215845820183        
S/G/Y/R/B/O NT_005322AC084193845980723        
S/G/Y/R/B/O NT_005322AC084297847817433        
S/G/Y/R/B/O NT_005322AC105342848920353        
S/G/Y/R/B/O NT_005322AC079997849741843        
S/G/Y/R/B/O NT_005322AC012075852064983AFM331XF12107.702103.161 AC012075
S/G/Y/R/B/O NT_005322AC013262852741983        
S/G/Y/R/B/O NT_005322AC079246854187573        
S/G/Y/R/B/O NT_005322AC105419855166973        
S/G/Y/R/B/O NT_005322AC069151856282503        
S/G/Y/R/B/O NT_005322AC079896856639443        
S/G/Y/R/B/O NT_005322AC010985857987333        
S/G/Y/R/B/O NT_005322AC114767859928531        
S/G/Y/R/B/O NT_005322AC105761859939981        
S/G/Y/R/B/O NT_005322AC010105861420403AFM044XA12107.102103.161 AC010105
S/G/Y/R/B/O NT_005322AC109638861879363        
S/G/Y/R/B/O NT_005322AC104799863752993GATA71D09  2103.161AC114767, AC026893, AC034300, AC104799, AC114767
S/G/Y/R/B/O NT_005322AC104799864095253GATA14B12  2103.161AC114767, AC026893, AC034300, AC104799, AC114767
S/G/Y/R/B/O NT_005322AC098817864535993        
S/G/Y/R/B/O NT_005322AC105349866060353        
S/G/Y/R/B/O NT_005322AC013719866132873        
S/G/Y/R/B/O NT_005322AC010903868259513AFMA129XE92107.702103.161 AC010903
S/G/Y/R/B/O NT_005322AC013786868559061        
S/G/Y/R/B/O NT_005322AC007670868636331        
S/G/Y/R/B/O NT_005322AC069093868710461        
S/G/Y/R/B/O NT_005322 - GATA62B10  2103.160AC010087, AC022210, AC010087, AC022210