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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005078
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005078AC0938232157967783        
S/G/Y/R/B/O NT_005078AC0928402159524833        
S/G/Y/R/B/O NT_005078AC0965472160835253        
S/G/Y/R/B/O NT_005078AC1082162162106753        
S/G/Y/R/B/O NT_005078AC0926802162430183        
S/G/Y/R/B/O NT_005078AC0791192164410463        
S/G/Y/R/B/O NT_005078AC0967652164436643        
S/G/Y/R/B/O NT_005078AC0938652166201813AFM094XF112215.102208.581 AC093865
S/G/Y/R/B/O NT_005078AC0933812168672323AFMC009YH12217.302210.431 AC093381
S/G/Y/R/B/O NT_005078AC1080662169481753UT1385  2210.431 AC108066
S/G/Y/R/B/O NT_005078AC0137362170634723GATA42E06  2210.431 AC013736
S/G/Y/R/B/O NT_005078AC0796102171255273        
S/G/Y/R/B/O NT_005078AC0242462172845583        
S/G/Y/R/B/O NT_005078AC0965652173748783        
S/G/Y/R/B/O NT_005078AC1144992175453943        
S/G/Y/R/B/O NT_005078AC0648412175751203        
S/G/Y/R/B/O NT_005078AC0930422176429493        
S/G/Y/R/B/O NT_005078AC0099642176984043GATA30E06  2210.431 AC009964
S/G/Y/R/B/O NT_005078AC0099642177507713AFM273VA92217.602210.431 AC034261
S/G/Y/R/B/O NT_005078AC0926182178935273        
S/G/Y/R/B/O NT_005078AC0081692180452123AFM275VH52217.502210.431 AC008169
S/G/Y/R/B/O NT_005078AC0081692180917253AFM191XB82217.002210.431 AC008169
S/G/Y/R/B/O NT_005078AC0082792181784563GATA26D05  2210.431 AC008279
S/G/Y/R/B/O NT_005078AC0082792182109223AFM143XD122217.102210.431 AC008279
S/G/Y/R/B/O NT_005078AC0082792182842143ATA21C10  2210.431 AC008279
S/G/Y/R/B/O NT_005078AC0984862183178463        
S/G/Y/R/B/O NT_005078 - UT6232  2210.430AC008123, AC012513, AC008123, AC012513
S/G/Y/R/B/O NT_005078 - AFMA101XG52217.402210.431AC011609, AC011609, AC021997
S/G/Y/R/B/O NT_005078 - AFM172XG32217.50  1AC010686, AC010686