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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005370
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005370AC0734102063245153        
S/G/Y/R/B/O NT_005370AC0099602064393743        
S/G/Y/R/B/O NT_005370AC0988312066473573        
S/G/Y/R/B/O NT_005370AC0132452067073471AFMB316ZC52205.402199.181 AC013245
S/G/Y/R/B/O NT_005370AC0109002067177813        
S/G/Y/R/B/O NT_005370AC0232712069258053        
S/G/Y/R/B/O NT_005370AC0117372070303043        
S/G/Y/R/B/O NT_005370AC0800752072050133        
S/G/Y/R/B/O NT_005370AC0188912073003833        
S/G/Y/R/B/O NT_005370AC0693142074744573        
S/G/Y/R/B/O NT_005370AF2258992075773633        
S/G/Y/R/B/O NT_005370AC0101382077002033AFM074XG92205.402199.181 AC010138, AF411058
S/G/Y/R/B/O NT_005370AC0101382078052193MFD36  2198.651 AF411058
S/G/Y/R/B/O NT_005370AC0101382078404453MFD156A  2196.851 AF411058, AF411059
S/G/Y/R/B/O NT_005370AC1038802078408583        
S/G/Y/R/B/O NT_005370AC0099652080138343GATA161E02  2198.651 AC009965
S/G/Y/R/B/O NT_005370AC0099652080235113AFMA203ZF12205.402199.181 AC009965
S/G/Y/R/B/O NT_005370AC0094982080528243        
S/G/Y/R/B/O NT_005370AC1069012082727003GATA52A04  2200.431 AC106901
S/G/Y/R/B/O NT_005370AC0169032083419013        
S/G/Y/R/B/O NT_005370AC0077362086748273AFM199YF22206.402200.431 AC007736
S/G/Y/R/B/O NT_005370AC0081682086846893        
S/G/Y/R/B/O NT_005370AC0093162087408093        
S/G/Y/R/B/O NT_005370AC1084682088868133        
S/G/Y/R/B/O NT_005370AC0117502089121383        
S/G/Y/R/B/O NT_005370AC0081712090493043        
S/G/Y/R/B/O NT_005370AC0074652091767503        
S/G/Y/R/B/O NT_005370AC0077462093468553        
S/G/Y/R/B/O NT_005370AC0073852093919513        
S/G/Y/R/B/O NT_005370AC0073622095798133        
S/G/Y/R/B/O NT_005370AC0075612096956523        
S/G/Y/R/B/O NT_005370AC0076792098015453        
S/G/Y/R/B/O NT_005370AC0926772099713783        
S/G/Y/R/B/O NT_005370AC0073832099944803AFM210YF102209.802202.921 AC007383, AC021980
S/G/Y/R/B/O NT_005370AC0073832100603263GATA74C07  2202.921 AC007383, AC021980
S/G/Y/R/B/O NT_005370AC0170812101863503        
S/G/Y/R/B/O NT_005370AC0092252103887983ATC3E01  2205.061 AC009225
S/G/Y/R/B/O NT_005370AC0092252104363193AFM304TB52209.302202.921 AC009225
S/G/Y/R/B/O NT_005370AC0791362104951643        
S/G/Y/R/B/O NT_005370AC0107312105768643AFMA050YA52209.802203.461 AC010731
S/G/Y/R/B/O NT_005370AC0082692106296073        
S/G/Y/R/B/O NT_005370AC0190522107913423        
S/G/Y/R/B/O NT_005370AC0080622109090973        
S/G/Y/R/B/O NT_005370AC0078792111544993AFM296XB92210.902204.531 AC007879
S/G/Y/R/B/O NT_005370AC0078792111610283AFMA216ZD12210.902204.531 AC007879