Home    Genome Browser    BLAT Search    Help
  Chromosome 2 - Genetic Maps - Single Contig
 

Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_019306
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019306AC0620271131220751        
S/G/Y/R/B/O NT_019306AC0170021131483573        
S/G/Y/R/B/O NT_019306AC0931661133582263        
S/G/Y/R/B/O NT_019306AC1046511136232103AFMA041XC12127.402122.961 AC104651
S/G/Y/R/B/O NT_019306AC0936751136870451        
S/G/Y/R/B/O NT_019306AC1122461137633081        
S/G/Y/R/B/O NT_019306AC1151151137928461        
S/G/Y/R/B/O NT_019306AC0926451139343333AFMB285XF92127.402122.961AC115115, AC092645, AC115115
S/G/Y/R/B/O NT_019306AC0926451139781243AFM220ZE32127.402122.961AC115115, AC092645, AC115115
S/G/Y/R/B/O NT_019306AC1122351141262901        
S/G/Y/R/B/O NT_019306AC0678021141284141        
S/G/Y/R/B/O NT_019306AC0620141141309321        
S/G/Y/R/B/O NT_019306AC0124421141425413        
S/G/Y/R/B/O NT_019306AC0799221143155813        
S/G/Y/R/B/O NT_019306AC0797531144805503        
S/G/Y/R/B/O NT_019306AC0842801146347643        
S/G/Y/R/B/O NT_019306AC0167241146487303        
S/G/Y/R/B/O NT_019306AC0247041148440383        
S/G/Y/R/B/O NT_019306AC0166831149931473AFMA037XF12128.002123.491 AC016683
S/G/Y/R/B/O NT_019306AC0167451150381563        
S/G/Y/R/B/O NT_019306AL0786211151898423        
S/G/Y/R/B/O NT_019306AC0170741154796683AFM087XA12127.902123.491 AC017074
S/G/Y/R/B/O NT_019306AC1046531155070081        
S/G/Y/R/B/O NT_019306AC1107691156176903        
S/G/Y/R/B/O NT_019306AC0109821156922903        
S/G/Y/R/B/O NT_019306AC1050501159093973        
S/G/Y/R/B/O NT_019306AC0234861160115141        
S/G/Y/R/B/O NT_019306AC0461561160182441        
S/G/Y/R/B/O NT_019306AC0266841160259811        
S/G/Y/R/B/O NT_019306AC0161471160361671        
S/G/Y/R/B/O NT_019306AC0921071160373241        
S/G/Y/R/B/O NT_019306AC0186881160510483        
S/G/Y/R/B/O NT_019306AC0161511162213521        
S/G/Y/R/B/O NT_019306AC0685421164131673UT2131  2124.031 AC068542
S/G/Y/R/B/O NT_019306AC0120711165046233        
S/G/Y/R/B/O NT_019306AC0108851168394883AFM234TE12128.602124.031AC104075, AC010885, AC104075
S/G/Y/R/B/O NT_019306AC0108851168745683GATA123B03  2124.031AC104074, AC104075, AC010885, AC104074, AC104075
S/G/Y/R/B/O NT_019306AC1073871168770733        
S/G/Y/R/B/O NT_019306AC1040741169758241        
S/G/Y/R/B/O NT_019306AC1040751169903571        
S/G/Y/R/B/O NT_019306 - UT7798  2124.031AC062016, AC062016