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  Chromosome 2 - Genetic Maps - Single Contig
 

Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005151
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005151AC0793471548038633        
S/G/Y/R/B/O NT_005151AC0120661549004223        
S/G/Y/R/B/O NT_005151AC0937941550887693        
S/G/Y/R/B/O NT_005151AC0124431551181953        
S/G/Y/R/B/O NT_005151AC0793441552698053        
S/G/Y/R/B/O NT_005151AC0099691553709853AFMB331YF12162.502157.551 AC009969
S/G/Y/R/B/O NT_005151AC0730671555261553        
S/G/Y/R/B/O NT_005151AC1046241555452333        
S/G/Y/R/B/O NT_005151AC0966481555557953        
S/G/Y/R/B/O NT_005151AC0119011555782563        
S/G/Y/R/B/O NT_005151AC0133951557778231        
S/G/Y/R/B/O NT_005151AC0791501557779933        
S/G/Y/R/B/O NT_005151AC0125011559527753        
S/G/Y/R/B/O NT_005151AC1108071562469683AFM199ZB82161.902156.921AC068537, AP000883, AC068537, AC110807, AP000883
S/G/Y/R/B/O NT_005151AC0685371562881023        
S/G/Y/R/B/O NT_005151AC0925841563219003        
S/G/Y/R/B/O NT_005151AC0739941564789351        
S/G/Y/R/B/O NT_005151AC0162871565086041        
S/G/Y/R/B/O NT_005151AC0684371565567681        
S/G/Y/R/B/O NT_005151AC0790781565954621        
S/G/Y/R/B/O NT_005151AC0925891566250133        
S/G/Y/R/B/O NT_005151AC0081661567746923AFM144YF82162.602157.551 AC008166
S/G/Y/R/B/O NT_005151AC0092971568517093        
S/G/Y/R/B/O NT_005151AC0092271569432543        
S/G/Y/R/B/O NT_005151AC0107301571172033        
S/G/Y/R/B/O NT_005151AC0619611572829543        
S/G/Y/R/B/O NT_005151AC1070601573541943        
S/G/Y/R/B/O NT_005151AC0936331573563073        
S/G/Y/R/B/O NT_005151AC0931121575273733        
S/G/Y/R/B/O NT_005151AC0926251575847873        
S/G/Y/R/B/O NT_005151AC0792561577078553GATA113F01  2161.261 AC079256
S/G/Y/R/B/O NT_005151AC0965781577971603        
S/G/Y/R/B/O NT_005151AC0926621578038803        
S/G/Y/R/B/O NT_005151AC1048181580465403AFM191WG92166.302161.261 AC023652, AC104818
S/G/Y/R/B/O NT_005151AC0967641580505763        
S/G/Y/R/B/O NT_005151AC0732251581100623        
S/G/Y/R/B/O NT_005151AC0679581582617503        
S/G/Y/R/B/O NT_005151AC0681361583347323        
S/G/Y/R/B/O NT_005151AC0687021584016621        
S/G/Y/R/B/O NT_005151AC0739021585979823AFM183XC32166.302161.261 AC073902
S/G/Y/R/B/O NT_005151AC0933751586354133        
S/G/Y/R/B/O NT_005151AC0735511586430533        
S/G/Y/R/B/O NT_005151AC0685521586900813        
S/G/Y/R/B/O NT_005151AC0740991588519273        
S/G/Y/R/B/O NT_005151AC0926861589935803        
S/G/Y/R/B/O NT_005151AC0113081591093353        
S/G/Y/R/B/O NT_005151AC0218491592320753        
S/G/Y/R/B/O NT_005151AC0965891594005853        
S/G/Y/R/B/O NT_005151AC1080571595613263AFM094XB32166.302161.261 AC064845, AC108057
S/G/Y/R/B/O NT_005151AC0926241596809703        


  NT_005151 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005151AC0167321597801283        
S/G/Y/R/B/O NT_005151AC0192011599548693        
S/G/Y/R/B/O NT_005151AC0797501601208803        
S/G/Y/R/B/O NT_005151AC0191861602219693        
S/G/Y/R/B/O NT_005151AC0137311604151843AFM192YD22167.002161.811 AC013731
S/G/Y/R/B/O NT_005151AC0914881605369213        
S/G/Y/R/B/O NT_005151AC0055391605585013        
S/G/Y/R/B/O NT_005151AC0691461607661143        
S/G/Y/R/B/O NT_005151AC0190441608868843        
S/G/Y/R/B/O NT_005151AC0080701610113813        
S/G/Y/R/B/O NT_005151AC0050421613223953ATA27H09  2164.511 AC005042
S/G/Y/R/B/O NT_005151AC0798771613562633        
S/G/Y/R/B/O NT_005151AC0648431614395603        
S/G/Y/R/B/O NT_005151AC1053461615044583        
S/G/Y/R/B/O NT_005151AC0100931615788833        
S/G/Y/R/B/O NT_005151AC0093071618398973AFMA061XE12170.102165.061 AC006501, AC009307
S/G/Y/R/B/O NT_005151AC0093071618851443AFM164WA112170.202164.511 AC006501, AC009307
S/G/Y/R/B/O NT_005151AC0082771618896713        
S/G/Y/R/B/O NT_005151AC0095061620665603        
S/G/Y/R/B/O NT_005151AC0099611623258913AFM225ZD82170.302164.811 AC009291, AC009961
S/G/Y/R/B/O NT_005151AC0099611624122363AFM211YD62170.502164.511 AC009961
S/G/Y/R/B/O NT_005151AC0875941624745951        
S/G/Y/R/B/O NT_005151AC0938731624764613        
S/G/Y/R/B/O NT_005151AC0801661626867813        
S/G/Y/R/B/O NT_005151AC0921531627680743        
S/G/Y/R/B/O NT_005151AC1045981629167153        
S/G/Y/R/B/O NT_005151AP0008831630488301        
S/G/Y/R/B/O NT_005151 - AFMB317ZG12170.402164.510 D82352