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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005214
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005214AC073851174580561        
S/G/Y/R/B/O NT_005214AC018591174639761        
S/G/Y/R/B/O NT_005214AC092594176444023        
S/G/Y/R/B/O NT_005214AC097719178038733        
S/G/Y/R/B/O NT_005214AC012446178738783AFM331ZG5240.70  1 AC012446
S/G/Y/R/B/O NT_005214AC012446178738783AFM331ZG5  238.871 AC012446
S/G/Y/R/B/O NT_005214AC012446179498193AFM073YA5240.70  1AC073851, AC012446, AC073851
S/G/Y/R/B/O NT_005214AC012446179498193AFM073YA5  238.871AC073851, AC012446, AC073851
S/G/Y/R/B/O NT_005214AC018741180854323AFM234XE3241.80  1 AC016391, AC018741
S/G/Y/R/B/O NT_005214AC018741180854323AFM234XE3  239.931 AC016391, AC018741
S/G/Y/R/B/O NT_005214AC018741181451323ATA9E06  242.651 AC016391, AC018741, AC069283
S/G/Y/R/B/O NT_005214AC010096183305793AFMA341YE1241.90  1 AC010096
S/G/Y/R/B/O NT_005214AC010096183305793AFMA341YE1  239.931 AC010096
S/G/Y/R/B/O NT_005214AC019055184733833AFM260XC5241.90  1 AC019055
S/G/Y/R/B/O NT_005214AC019055184733833AFM260XC5  239.931 AC019055
S/G/Y/R/B/O NT_005214AC013400185188843        
S/G/Y/R/B/O NT_005214AC079145186444263        
S/G/Y/R/B/O NT_005214AC098828188605983AFM331WE9242.50  1AC021877, AC116171, AC021877, AC098828, AC116171
S/G/Y/R/B/O NT_005214AC098828188605983AFM331WE9  240.471AC021877, AC116171, AC021877, AC098828, AC116171
S/G/Y/R/B/O NT_005214AC116171189077041        
S/G/Y/R/B/O NT_005214AC104792189197261        
S/G/Y/R/B/O NT_005214AC041029189582261        
S/G/Y/R/B/O NT_005214AC021877189650671        
S/G/Y/R/B/O NT_005214AC007041190658603AFMA108YF1242.50  1AC041029, AC104792, AC007041, AC041029, AC104792
S/G/Y/R/B/O NT_005214AC007041190658603AFMA108YF1  240.471AC041029, AC104792, AC007041, AC041029, AC104792
S/G/Y/R/B/O NT_005214AC023137191435233        
S/G/Y/R/B/O NT_005214AC012065192162863        
S/G/Y/R/B/O NT_005214AC023124194221071        
S/G/Y/R/B/O NT_005214AC012361196200313MFD292  242.651 AC012361
S/G/Y/R/B/O NT_005214 - AFM338YC1239.10  1AC008164, AC008164
S/G/Y/R/B/O NT_005214 - AFMA116XD9240.20  1AC068487, AC068520, AC104812, AC068487, AC068520, AC104812
S/G/Y/R/B/O NT_005214 - AFM270XH9240.20  1AC068614, AC068614
S/G/Y/R/B/O NT_005214 - AFM137XG11240.20  1AC079802, AC093624, AC079802, AC093624
S/G/Y/R/B/O NT_005214 - AFMA070WE9240.70  1AC079148, AC079148