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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005058
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005058AC0926521433792303        
S/G/Y/R/B/O NT_005058AC0795841435412053        
S/G/Y/R/B/O NT_005058AC0169101436166633        
S/G/Y/R/B/O NT_005058AC0106811438719303AFM157XE32155.902150.961 AC010681
S/G/Y/R/B/O NT_005058AC0099571438941713        
S/G/Y/R/B/O NT_005058AC0101301440964313GGAA26B01  2150.961 AC010130
S/G/Y/R/B/O NT_005058AC0101301441434233GGAA2A01  2150.961 AC010130
S/G/Y/R/B/O NT_005058AC0099511441882233        
S/G/Y/R/B/O NT_005058AC0100901443460143        
S/G/Y/R/B/O NT_005058AC0231281445857283AFM321YG52156.402151.501 AC023128
S/G/Y/R/B/O NT_005058AC0740151446303243        
S/G/Y/R/B/O NT_005058AC0126701447316233AFMB357ZH12156.402151.501 AC012670
S/G/Y/R/B/O NT_005058AC0740931448258403        
S/G/Y/R/B/O NT_005058AC0966661449790223        
S/G/Y/R/B/O NT_005058AC0648651451108693        
S/G/Y/R/B/O NT_005058AC0924841453124753AFM312VF1  2149.891AC023433, AC023433, AC092484
S/G/Y/R/B/O NT_005058AC0791631454375153AFM301ZA5  2152.041 AC079163
S/G/Y/R/B/O NT_005058AC0791631454404013AFM218XA1  2152.041 AC079163
S/G/Y/R/B/O NT_005058AC0791631455411273AFM094YE92155.902150.961 AC079163
S/G/Y/R/B/O NT_005058AC0124481455457041        
S/G/Y/R/B/O NT_005058AC0234331455515011        
S/G/Y/R/B/O NT_005058AC0792481455625263        
S/G/Y/R/B/O NT_005058AC0620311456910613        
S/G/Y/R/B/O NT_005058AC1053971458636533        
S/G/Y/R/B/O NT_005058AC0094761460213673AFMB334ZA52157.002152.041AC112712, AC009476, AC112712
S/G/Y/R/B/O NT_005058AC1127121460841701        
S/G/Y/R/B/O NT_005058AC1059221461164131        
S/G/Y/R/B/O NT_005058AC0930841461961013        
S/G/Y/R/B/O NT_005058AC0931131463640613        
S/G/Y/R/B/O NT_005058AC1038811465376173        
S/G/Y/R/B/O NT_005058AC0620321467710023AFMB285XG92156.402152.041 AC062032, AC079297
S/G/Y/R/B/O NT_005058AC0620321468111963AFM207VF82156.402152.041 AC062032, AC079297
S/G/Y/R/B/O NT_005058AC0186781468238643        
S/G/Y/R/B/O NT_005058AC0263371469938313        
S/G/Y/R/B/O NT_005058AC0693331470350723        
S/G/Y/R/B/O NT_005058AC0134061472347733GGAA20G04  2152.041 AC013406
S/G/Y/R/B/O NT_005058AC0126661473624903AFM210XB22157.002152.041 AC011943
S/G/Y/R/B/O NT_005058AC1047761473742483        
S/G/Y/R/B/O NT_005058AC0742391475063813GATA135B11  2152.041 AC074239
S/G/Y/R/B/O NT_005058AC0094801475509743        
S/G/Y/R/B/O NT_005058AC0192261478336773MFD301  2150.961 AC019226
S/G/Y/R/B/O NT_005058AC0793911478695713        
S/G/Y/R/B/O NT_005058AC0184651478847063AFM294VF52156.902152.041 AC018465
S/G/Y/R/B/O NT_005058AC0190701481230343AFM102XD82155.902150.961 AC019070
S/G/Y/R/B/O NT_005058AC0926051481942773AFMA191XG52157.002152.041 AC092605
S/G/Y/R/B/O NT_005058AC0167311481984713        
S/G/Y/R/B/O NT_005058AC0170801483165533        
S/G/Y/R/B/O NT_005058AC0167631485003653        
S/G/Y/R/B/O NT_005058AC1054021486434483        
S/G/Y/R/B/O NT_005058AC0731191487069971        


  NT_005058 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005058 - AFM143XE112154.80  1AC079585, AC079585