Home    Genome Browser    BLAT Search    Help
  Chromosome 2 - Genetic Maps - Single Contig
 

Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005375
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005375AC024409641227031        
S/G/Y/R/B/O NT_005375AC084394641393691        
S/G/Y/R/B/O NT_005375AC074391641594113        
S/G/Y/R/B/O NT_005375AC023351643691063        
S/G/Y/R/B/O NT_005375AC009503644105333AFM205YG7288.00283.881 AC009503
S/G/Y/R/B/O NT_005375AC009503645196433AFM172XE7287.50283.881 AC009503
S/G/Y/R/B/O NT_005375AC007741646211463AFMA346XD9288.00283.881 AC007741
S/G/Y/R/B/O NT_005375AC007741646694923AFMB322YH5288.00283.881 AC007741, AC079251
S/G/Y/R/B/O NT_005375AC007389647109693        
S/G/Y/R/B/O NT_005375AC012370649682443AFM321XD9288.00283.881 AC012370
S/G/Y/R/B/O NT_005375AC012370649884033AFMA341XA9288.00284.421 AC012370
S/G/Y/R/B/O NT_005375AC097503650213233        
S/G/Y/R/B/O NT_005375AC007318651078433        
S/G/Y/R/B/O NT_005375AC084278653100733        
S/G/Y/R/B/O NT_005375AC007386653120673        
S/G/Y/R/B/O NT_005375AC007880654886093        
S/G/Y/R/B/O NT_005375AC007365656106323        
S/G/Y/R/B/O NT_005375AC008074658840393ATA17C10  282.821 AC008074
S/G/Y/R/B/O NT_005375AC008074659805443AFMA103WH1286.30282.821 AC008074
S/G/Y/R/B/O NT_005375AC114752659928041        
S/G/Y/R/B/O NT_005375AC009832660103901        
S/G/Y/R/B/O NT_005375AC093108660403343UT5213  283.881 AC093108
S/G/Y/R/B/O NT_005375AC092669661870893AFM168XG11288.00283.881 AC092669
S/G/Y/R/B/O NT_005375AC092669662031233AFM203WB6288.00284.421 AC092669
S/G/Y/R/B/O NT_005375AC093641662430923        
S/G/Y/R/B/O NT_005375AC007392663282013AFM234ZH2288.00284.421 AC007392
S/G/Y/R/B/O NT_005375AC009474665129103GATA8G06  285.481 AC009474
S/G/Y/R/B/O NT_005375AC009474665396193AFM320YD9289.20285.481 AC009474
S/G/Y/R/B/O NT_005375AC009474665711273GATA66D01  285.481 AC009474
S/G/Y/R/B/O NT_005375AC007403666628233AFM349TH9289.20285.481 AC007403
S/G/Y/R/B/O NT_005375AC007403667336353AFMA059WF5289.20285.481 AC007403
S/G/Y/R/B/O NT_005375AC078941668675903AFM184YC1289.10286.021 AC019040, AC078941
S/G/Y/R/B/O NT_005375AC023115669856893        
S/G/Y/R/B/O NT_005375AC023668671664323AFM038XH8289.90286.021 AC023668, AP002005
S/G/Y/R/B/O NT_005375AC092571672503883        
S/G/Y/R/B/O NT_005375AC007422673560703AFM154XF8289.80286.021 AC007422
S/G/Y/R/B/O NT_005375AC010987674052923        
S/G/Y/R/B/O NT_005375AC093751675966113        
S/G/Y/R/B/O NT_005375AC079112677039283MFD115  288.151 AC079112
S/G/Y/R/B/O NT_005375AC079112677590413GATA72C01  286.821 AC079112
S/G/Y/R/B/O NT_005375AC017083678296483        
S/G/Y/R/B/O NT_005375AC015969680259263        
S/G/Y/R/B/O NT_005375AC018462681476023        
S/G/Y/R/B/O NT_005375AC093401684070023AFMA244XD1284.90281.491 AC093401
S/G/Y/R/B/O NT_005375AC093159684340163        
S/G/Y/R/B/O NT_005375AC107083686076141        
S/G/Y/R/B/O NT_005375AC073966686455941        
S/G/Y/R/B/O NT_005375AC092155687191053AFMA306YF9286.20282.822AC073966, AC023942, AC073966, AC092155
S/G/Y/R/B/O NT_005375AC092567689607853AFMC006YD9286.30282.291 AC092567
S/G/Y/R/B/O NT_005375AC007098689781513        


  NT_005375 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005375AC009501691346203        
S/G/Y/R/B/O NT_005375AC074367692915933        
S/G/Y/R/B/O NT_005375AC067953693916983        
S/G/Y/R/B/O NT_005375AC079353694809073        
S/G/Y/R/B/O NT_005375AC016734695940403        
S/G/Y/R/B/O NT_005375AC096664698126763        
S/G/Y/R/B/O NT_005375AC114748698946721        
S/G/Y/R/B/O NT_005375AC013466699919491        
S/G/Y/R/B/O NT_005375AC092588700577973AFM199VB6285.70282.291AC013466, AC013466, AC092588
S/G/Y/R/B/O NT_005375AC012368701477913        
S/G/Y/R/B/O NT_005375AC074289703419973        
S/G/Y/R/B/O NT_005375AC079381705046331        
S/G/Y/R/B/O NT_005375 - UT18  283.881AC108004, AC108004