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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005343
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005343AC0191811675305803        
S/G/Y/R/B/O NT_005343AC0926551677215783        
S/G/Y/R/B/O NT_005343AC0191971678275383AFMA119YH52175.102169.411 AC019197
S/G/Y/R/B/O NT_005343AC0134631679681303AFM321ZF92174.902169.411 AC013463
S/G/Y/R/B/O NT_005343AC0134381680663203        
S/G/Y/R/B/O NT_005343AC0113031681454233AFM094ZC92175.402169.411 AC011303, AC016740
S/G/Y/R/B/O NT_005343AC0113031682605913AFM021TC12175.002169.411 AC011303
S/G/Y/R/B/O NT_005343AC0113031683075193AFM164ZA52175.202169.411 AC011303
S/G/Y/R/B/O NT_005343AC1080311683169213        
S/G/Y/R/B/O NT_005343AC0191401685583533AFMA053ZE12175.602169.411 AC019140
S/G/Y/R/B/O NT_005343AC0094951686451193AFMA083XD12175.302169.411 AC009495
S/G/Y/R/B/O NT_005343AC0112411686977713AFMC015YD92175.502169.411 AC011241
S/G/Y/R/B/O NT_005343AC0101271688024073        
S/G/Y/R/B/O NT_005343AC1070821689922733        
S/G/Y/R/B/O NT_005343AC1081461691012173        
S/G/Y/R/B/O NT_005343AC0741011691930273        
S/G/Y/R/B/O NT_005343AC0925831693447503        
S/G/Y/R/B/O NT_005343AC1044091694981093        
S/G/Y/R/B/O NT_005343AC1040691695848563        
S/G/Y/R/B/O NT_005343AC0930401697379623        
S/G/Y/R/B/O NT_005343AC0926011698721393GATA42D08  2169.411 AC092601
S/G/Y/R/B/O NT_005343AC0108361699363201        
S/G/Y/R/B/O NT_005343AC0224211699434851        
S/G/Y/R/B/O NT_005343AC1084941700008091AFMA131WB92174.802169.411AC010836, AC010836, AC108494
S/G/Y/R/B/O NT_005343AC0936841700115573        
S/G/Y/R/B/O NT_005343AC0730501701716993        
S/G/Y/R/B/O NT_005343AC1060491703052853        
S/G/Y/R/B/O NT_005343AC0743631703540273        
S/G/Y/R/B/O NT_005343AC0170701705033523        
S/G/Y/R/B/O NT_005343AC1052551706522943        
S/G/Y/R/B/O NT_005343AC0167231707321573AFM080XG92177.202171.041 AC016723
S/G/Y/R/B/O NT_005343AC0170691708545433        
S/G/Y/R/B/O NT_005343AC0679401709957953        
S/G/Y/R/B/O NT_005343AC0843711712891273UT493  2173.001 AC018932
S/G/Y/R/B/O NT_005343AC0190861712977483        
S/G/Y/R/B/O NT_005343AC0974531714956823        
S/G/Y/R/B/O NT_005343AC0094751716571543GATA71D01  2173.001 AC009475
S/G/Y/R/B/O NT_005343AC0691371717008423        
S/G/Y/R/B/O NT_005343AC0937231718076783        
S/G/Y/R/B/O NT_005343AC0081771718096723        
S/G/Y/R/B/O NT_005343AC0075561719606683        
S/G/Y/R/B/O NT_005343AC0081781721278263        
S/G/Y/R/B/O NT_005343AC1107801722409933        
S/G/Y/R/B/O NT_005343AC0938991723886473AFM205XF12  2174.301 AC093899
S/G/Y/R/B/O NT_005343AC0938991723886473AFM205XF122180.70  1 AC093899
S/G/Y/R/B/O NT_005343AC0167721724838943        
S/G/Y/R/B/O NT_005343AC0099671725705033        
S/G/Y/R/B/O NT_005343AC0791511727465093        
S/G/Y/R/B/O NT_005343AC0926411727768133        
S/G/Y/R/B/O NT_005343AC0791221729939881