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Chromosome 2 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005120
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005120AC1148142387774561GATA151D12  2247.851 AC114814
S/G/Y/R/B/O NT_005120AC0101482390685323AFM275YF52253.002245.441AC104394, AC104394
S/G/Y/R/B/O NT_005120AC1043942391162321        
S/G/Y/R/B/O NT_005120AC0925762392309113        
S/G/Y/R/B/O NT_005120AC1070842393351283        
S/G/Y/R/B/O NT_005120AC0937852393516323        
S/G/Y/R/B/O NT_005120AC0123052394140983        
S/G/Y/R/B/O NT_005120AC0739892396024833        
S/G/Y/R/B/O NT_005120AC0648742397196493AFMA239YC52256.202249.221 AC064874
S/G/Y/R/B/O NT_005120AC0794002398831033GCT8B09  2249.221 AC079400
S/G/Y/R/B/O NT_005120AC0190472399695873        
S/G/Y/R/B/O NT_005120AC0791352401325943        
S/G/Y/R/B/O NT_005120AC0190682403250863AFM276ZF52258.702250.541 AC019068
S/G/Y/R/B/O NT_005120AC0939152403486083        
S/G/Y/R/B/O NT_005120AC0796112404670243        
S/G/Y/R/B/O NT_005120AC0840302406438073        
S/G/Y/R/B/O NT_005120AC0112862408916483AFM288VB12258.702251.241 AC011286
S/G/Y/R/B/O NT_005120AC0120632409640923GAAT3C11  2251.241 AC012063
S/G/Y/R/B/O NT_005120AC1057602410362563        
S/G/Y/R/B/O NT_005120AC1070792411680891GATA178G09  2251.941 AC107079
S/G/Y/R/B/O NT_005120AC1127152412030501        
S/G/Y/R/B/O NT_005120AC0258952412804252        
S/G/Y/R/B/O NT_005120AC1127212413951591        
S/G/Y/R/B/O NT_005120AC0259332413952711        
S/G/Y/R/B/O NT_005120AC0682662415684651        
S/G/Y/R/B/O NT_005120AC1046672415928581        
S/G/Y/R/B/O NT_005120AC0965742416691793        
S/G/Y/R/B/O NT_005120AC0120762417280933        
S/G/Y/R/B/O NT_005120AC0167762419891143AFM312YE12277.002269.071 AC016776
S/G/Y/R/B/O NT_005120AC0167572421355933        
S/G/Y/R/B/O NT_005120AC0124852422917633        
S/G/Y/R/B/O NT_005120AC0169992424585013        
S/G/Y/R/B/O NT_005120AC0926192425502793        
S/G/Y/R/B/O NT_005120AC1136182427117541        
S/G/Y/R/B/O NT_005120AC0734252427599573        
S/G/Y/R/B/O NT_005120AC0138112429373781        
S/G/Y/R/B/O NT_005120AC0235862429894391