Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_008023

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_008023	AC108925	128644093	3	chr8	NT_008023	AC103819	128803197	3	54269	0	0	54269
S/G/Y/R/B/O	NT_008023	AC108925	128644093	3			AF315312	128803197		48499	0	0	48499
S/G/Y/R/B/O	NT_008023	AC108925	128644093	3			AF315312	128803197		48499	0	0	48499
S/G/Y/R/B/O	NT_008023	AC103819	128803197	3	chr8	NT_008023	AC084123	128896932	3	0	406	0	406
S/G/Y/R/B/O	NT_008023	AC103819	128803197	3			AF315312	128644093		142086	0	0	142086
S/G/Y/R/B/O	NT_008023	AC103819	128803197	3			AF315312	128644093		142086	0	0	142086
S/G/Y/R/B/O	NT_008023	AC084123	128896932	3	chr8	NT_008023	AC103705	129017251	2	58668	0	0	58668
S/G/Y/R/B/O	NT_008023	AC084123	128896932	3			AC009790	128644093		38425	1229	6986	46640
S/G/Y/R/B/O	NT_008023	AC103705	129017251	2	chr8	NT_008023	AC026248	129117254	3	0	0	33729	33729
S/G/Y/R/B/O	NT_008023	AC103705	129017251	2			AC009790	128803197		105845	7444	6843	120132
S/G/Y/R/B/O	NT_008023	AC103705	129017251	2			AC009790	128803197		105845	7444	6843	120132
S/G/Y/R/B/O	NT_008023	AC026248	129117254	3	chr8	NT_008023	AC007860	129241249	3	89964	0	0	89964
S/G/Y/R/B/O	NT_008023	AC026248	129117254	3			AC021071	129241249		41390	0	47285	88675
S/G/Y/R/B/O	NT_008023	AC026248	129117254	3			AF303736	129017251		75619	0	5666	81285
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3	chr8	NT_008023	AC100822	129337577	3	27664	0	0	27664
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3			AC021071	129017251		115416	0	69101	184517
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3			AC084089	129117254		30524	0	0	30524
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3			AC090776	129117254		88598	0	0	88598
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3			AF188026	129337577		88585	0	0	88585
S/G/Y/R/B/O	NT_008023	AC007860	129241249	3			AF303736	129337577		90153	2403	5666	98222
S/G/Y/R/B/O	NT_008023	AC100822	129337577	3	chr8	NT_008023	AC067844	129496293	3	10991	0	0	10991
S/G/Y/R/B/O	NT_008023	AC100822	129337577	3			AC021071	129241249		27661	0	0	27661
S/G/Y/R/B/O	NT_008023	AC100822	129337577	3			AC090776	129496293		40031	0	0	40031
S/G/Y/R/B/O	NT_008023	AC100822	129337577	3			AF121899	129496293		57102	0	0	57102
S/G/Y/R/B/O	NT_008023	AC100822	129337577	3			AF188026	129496293		40029	0	0	40029
S/G/Y/R/B/O	NT_008023	AC067844	129496293	3	chr8	NT_008023	AC103822	129645385	3	46479	0	0	46479
S/G/Y/R/B/O	NT_008023	AC103822	129645385	3	chr8	NT_008023	AC015807	129653845	3	2543	0	0	2543
S/G/Y/R/B/O	NT_008023	AC015807	129653845	3	chr8	NT_008023	AC130313	129756577	3	46005	0	0	46005
S/G/Y/R/B/O	NT_008023	AC015807	129653845	3			AC087044	129496293		73966	1710	14160	89836
S/G/Y/R/B/O	NT_008023	AC130313	129756577	3	chr8	NT_008023	AC068570	129905053	2	0	0	0	0
S/G/Y/R/B/O	NT_008023	AC130313	129756577	3			AC087044	129653845		43985	1709	0	45694
S/G/Y/R/B/O	NT_008023	AC068570	129905053	2	chr8	NT_008023	AC015509	129966112	3	0	0	0	0
S/G/Y/R/B/O	NT_008023	AC068570	129905053	2			AC011198	129653845		46172	0	0	46172
S/G/Y/R/B/O	NT_008023	AC015509	129966112	3	chr8	NT_008023	AC104256	130118966	3	51199	0	0	51199
S/G/Y/R/B/O	NT_008023	AC104256	130118966	3	chr8	NT_008023	AC103833	130203563	3	9851	0	0	9851
S/G/Y/R/B/O	NT_008023	AC103833	130203563	3	chr8	NT_008023	AC013300	130398220	3	0	0	41071	41071
S/G/Y/R/B/O	NT_008023	AC103833	130203563	3			AC083960	130398220		36245	0	5693	41938
S/G/Y/R/B/O	NT_008023	AC013300	130398220	3	chr8	NT_008023	AC011257	130476086	3	0	0	0	0
S/G/Y/R/B/O	NT_008023	AC013300	130398220	3			AC023755	130118966		16100	0	0	16100
S/G/Y/R/B/O	NT_008023	AC013300	130398220	3			AC083960	130118966		83187	0	953	84140
S/G/Y/R/B/O	NT_008023	AC011257	130476086	3	chr8	NT_008023	AC011652	130589741	3	9534	0	0	9534
S/G/Y/R/B/O	NT_008023	AC011257	130476086	3			AC011680	130589741		23391	0	17225	40616
S/G/Y/R/B/O	NT_008023	AC011257	130476086	3			AC015594	130589741		77505	12412	5149	95066
S/G/Y/R/B/O	NT_008023	AC011257	130476086	3			AC023755	130589741		129762	0	0	129762
S/G/Y/R/B/O	NT_008023	AC011257	130476086	3			AC083960	130589741		106679	0	0	106679
S/G/Y/R/B/O	NT_008023	AC011652	130589741	3	chr8	NT_008023	AC016178	130595828	3	3408	0	0	3408
S/G/Y/R/B/O	NT_008023	AC011652	130589741	3			AC011680	130476086		15592	0	0	15592
S/G/Y/R/B/O	NT_008023	AC011652	130589741	3			AC023755	130595828		15412	0	0	15412
S/G/Y/R/B/O	NT_008023	AC016178	130595828	3	chr8	NT_008023	AC103718	130763384	3	0	0	0	0
S/G/Y/R/B/O	NT_008023	AC103718	130763384	3	chr8	NT_008023	AC022849	130823867	3	60489	0	0	60489
S/G/Y/R/B/O	NT_008023	AC022849	130823867	3	chr8	NT_008023	AC022973	130917889	3	0	0	0	0
S/G/Y/R/B/O	NT_008023	AC022973	130917889	3	chr8	NT_008023	AC103813	130969141	3	79073	0	0	79073
S/G/Y/R/B/O	NT_008023	AC022973	130917889	3	chr8	NT_008023	AC131568	131053270	1	14427	0	0	14427
S/G/Y/R/B/O	NT_008023	AC022973	130917889	3			AC084689	43351306		56219	19130	7536	82885
S/G/Y/R/B/O	NT_008023	AC022973	130917889	3			AL353668	131053270		129106	0	0	129106
S/G/Y/R/B/O	NT_008023	AC022973	130917889	3			AP005715	131053270		39149	0	0	39149
S/G/Y/R/B/O	NT_008023	AC103813	130969141	3	chr8	NT_008023	AC131568	131053270	1	19364	0	0	19364
S/G/Y/R/B/O	NT_008023	AC103813	130969141	3			AC084689	43351306		39890	3822	1294	45006
S/G/Y/R/B/O	NT_008023	AC103813	130969141	3			AL353668	131053270		84082	0	0	84082
S/G/Y/R/B/O	NT_008023	AC103813	130969141	3			AP005715	131053270		44067	0	0	44067
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1	chr8	NT_008023	AC103725	131149458	2	14277	0	0	14277
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1	chr8	NT_008023	AC022973	130917889	3	14427	0	0	14427
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1			AC019167	131053270		99236	9009	30942	139187
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1			AL353668	130969141		62095	0	0	62095
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1			AP005715	130969141		101212	2185	3804	107201
S/G/Y/R/B/O	NT_008023	AC131568	131053270	1			AP005857	142545116		20495	0	0	20495
S/G/Y/R/B/O	NT_008023	AC103725	131149458	2	chr8	NT_008023	AC009682	131274196	3	47778	0	0	47778
S/G/Y/R/B/O	NT_008023	AC103725	131149458	2			AC019167	131274196		55632	14300	6634	76566
S/G/Y/R/B/O	NT_008023	AC103725	131149458	2			AP005715	131053270		17346	0	0	17346
S/G/Y/R/B/O	NT_008023	AC103725	131149458	2			AP005790	131053270		11943	0	2800	14743
S/G/Y/R/B/O	NT_008023	AC103725	131149458	2			AP005857	142545116		67194	0	0	67194
S/G/Y/R/B/O	NT_008023	AC009682	131274196	3	chr8	NT_008023	AC055867	131429624	1	79401	2336	0	81737
S/G/Y/R/B/O	NT_008023	AC009682	131274196	3			AL358940	131149458		72244	0	0	72244
S/G/Y/R/B/O	NT_008023	AC009682	131274196	3			AP005664	131149458		60199	0	0	60199
S/G/Y/R/B/O	NT_008023	AC009682	131274196	3			AP005790	131149458		21923	0	2800	24723
S/G/Y/R/B/O	NT_008023	AC009682	131274196	3			AP005857	131149458		15641	0	0	15641
S/G/Y/R/B/O	NT_008023	AC055867	131429624	1
S/G/Y/R/B/O	NT_008023	AC055867	131429624	1			AL358940	131274196		96989	2337	0	99326
S/G/Y/R/B/O	NT_008023	AC055867	131429624	1			AL358940	131274196		96989	2337	0	99326
S/G/Y/R/B/O	NT_008023	AC055867	131429624	1			AP005664	131274196		132765	2338	4557	139660
S/G/Y/R/B/O	NT_008023	AC055867	131429624	1			AP005664	131274196		132765	2338	4557	139660