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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_008104 | AC068476 | 139914192 | 1 | chr8 | NT_008104 | AC027541 | 140111217 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008104 | AC068476 | 139914192 | 1 |   |   | AC124654 | 139666056 | | 46203 | 0 | 0 | 46203 |
S/G/Y/R/B/O |
NT_008104 | AC027541 | 140111217 | 3 | chr8 | NT_008104 | AC100807 | 140258550 | 3 | 16964 | 0 | 0 | 16964 |
S/G/Y/R/B/O |
NT_008104 | AC027541 | 140111217 | 3 |   |   | AC124654 | 140258550 | | 54487 | 0 | 0 | 54487 |
S/G/Y/R/B/O |
NT_008104 | AC100807 | 140258550 | 3 | chr8 | NT_008104 | AC053480 | 140373870 | 3 | 0 | 1442 | 0 | 1442 |
S/G/Y/R/B/O |
NT_008104 | AC100807 | 140258550 | 3 |   |   | AP005853 | 140373870 | | 105284 | 0 | 0 | 105284 |
S/G/Y/R/B/O |
NT_008104 | AC100807 | 140258550 | 3 |   |   | AP005853 | 140373870 | | 105284 | 0 | 0 | 105284 |
S/G/Y/R/B/O |
NT_008104 | AC053480 | 140373870 | 3 | chr8 | NT_008104 | AC087354 | 140532137 | 3 | 53203 | 0 | 0 | 53203 |
S/G/Y/R/B/O |
NT_008104 | AC053480 | 140373870 | 3 |   |   | AC021973 | 140373870 | | 53050 | 0 | 0 | 53050 |
S/G/Y/R/B/O |
NT_008104 | AC053480 | 140373870 | 3 |   |   | AP005853 | 140258550 | | 16908 | 0 | 0 | 16908 |
S/G/Y/R/B/O |
NT_008104 | AC087354 | 140532137 | 3 | chr8 | NT_008104 | AC090093 | 140663542 | 3 | 118507 | 0 | 0 | 118507 |
S/G/Y/R/B/O |
NT_008104 | AC087354 | 140532137 | 3 |   |   | AC021973 | 140258550 | | 147306 | 2842 | 33843 | 183991 |
S/G/Y/R/B/O |
NT_008104 | AC090093 | 140663542 | 3 | chr8 | NT_008104 | AC007869 | 140711985 | 3 | 2469 | 0 | 0 | 2469 |
S/G/Y/R/B/O |
NT_008104 | AC090093 | 140663542 | 3 |   |   | AC021827 | 140711985 | | 48268 | 0 | 0 | 48268 |
S/G/Y/R/B/O |
NT_008104 | AC090093 | 140663542 | 3 |   |   | AC021973 | 140711985 | | 27009 | 2835 | 87959 | 117803 |
S/G/Y/R/B/O |
NT_008104 | AC090093 | 140663542 | 3 |   |   | AC027100 | 140711985 | | 48268 | 0 | 0 | 48268 |
S/G/Y/R/B/O |
NT_008104 | AC090093 | 140663542 | 3 |   |   | AC091431 | 140532137 | | 14292 | 0 | 17399 | 31691 |
S/G/Y/R/B/O |
NT_008104 | AC007869 | 140711985 | 3 | chr8 | NT_008104 | AC021636 | 140906417 | 1 | 39232 | 0 | 0 | 39232 |
S/G/Y/R/B/O |
NT_008104 | AC007869 | 140711985 | 3 |   |   | AC008495 | 140532137 | | 164427 | 2597 | 0 | 167024 |
S/G/Y/R/B/O |
NT_008104 | AC007869 | 140711985 | 3 |   |   | AC021827 | 140906417 | | 119018 | 0 | 0 | 119018 |
S/G/Y/R/B/O |
NT_008104 | AC007869 | 140711985 | 3 |   |   | AC027100 | 140906417 | | 25770 | 2182 | 46648 | 74600 |
S/G/Y/R/B/O |
NT_008104 | AC007869 | 140711985 | 3 |   |   | AC091431 | 140663542 | | 41035 | 0 | 8414 | 49449 |
S/G/Y/R/B/O |
NT_008104 | AC021636 | 140906417 | 1 | chr8 | NT_008104 | AC021744 | 141006679 | 3 | 16449 | 0 | 0 | 16449 |
S/G/Y/R/B/O |
NT_008104 | AC021636 | 140906417 | 1 |   |   | AC008495 | 140711985 | | 33833 | 0 | 0 | 33833 |
S/G/Y/R/B/O |
NT_008104 | AC021636 | 140906417 | 1 |   |   | AC008495 | 140711985 | | 33833 | 0 | 0 | 33833 |
S/G/Y/R/B/O |
NT_008104 | AC021744 | 141006679 | 3 | chr8 | NT_008104 | AC040978 | 141129176 | 3 | 76412 | 0 | 0 | 76412 |
S/G/Y/R/B/O |
NT_008104 | AC021744 | 141006679 | 3 |   |   | AC007871 | 141006679 | | 34042 | 0 | 300 | 34342 |
S/G/Y/R/B/O |
NT_008104 | AC040978 | 141129176 | 3 | chr8 | NT_008104 | AC115836 | 141286475 | 3 | 4176 | 0 | 0 | 4176 |
S/G/Y/R/B/O |
NT_008104 | AC040978 | 141129176 | 3 |   |   | AC007871 | 141129176 | | 76579 | 0 | 38445 | 115024 |
S/G/Y/R/B/O |
NT_008104 | AC115836 | 141286475 | 3 | chr8 | NT_008104 | AC104008 | 141310662 | 3 | 77309 | 0 | 0 | 77309 |
S/G/Y/R/B/O |
NT_008104 | AC115836 | 141286475 | 3 | chr8 | NT_008104 | AC104244 | 141440560 | 3 | 23659 | 0 | 0 | 23659 |
S/G/Y/R/B/O |
NT_008104 | AC115836 | 141286475 | 3 |   |   | AC007871 | 141286475 | | 46598 | 0 | 0 | 46598 |
S/G/Y/R/B/O |
NT_008104 | AC104008 | 141310662 | 3 | chr8 | NT_008104 | AC104244 | 141440560 | 3 | 75713 | 0 | 21 | 75734 |
S/G/Y/R/B/O |
NT_008104 | AC104008 | 141310662 | 3 |   |   | AC007871 | 141440560 | | 18190 | 0 | 0 | 18190 |
S/G/Y/R/B/O |
NT_008104 | AC104244 | 141440560 | 3 | chr8 | NT_008104 | AC091022 | 141520647 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008104 | AC104244 | 141440560 | 3 | chr8 | NT_008104 | AC115836 | 141286475 | 3 | 23659 | 0 | 0 | 23659 |
S/G/Y/R/B/O |
NT_008104 | AC091022 | 141520647 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_008104 | AC091022 | 141520647 | 3 | chr8 | NT_034901 | AC107375 | 141651052 | 3 | 19043 | 0 | 0 | 19043 |
S/G/Y/R/B/O |
NT_008104 | AC091022 | 141520647 | 3 |   |   | AC069249 | 141286475 | | 66325 | 0 | 0 | 66325 |
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