Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_023679

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_023679	AC130319	48156000	3	chr8	NT_023679	AC104995	48160611	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC104995	48160611	3	chr8	NT_023679	AC024649	48319851	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC024649	48319851	3	chr8	NT_023679	AC024450	48403549	1	0	0	1927	1927
S/G/Y/R/B/O	NT_023679	AC024649	48319851	3			AC024451	48403549		17693	0	0	17693
S/G/Y/R/B/O	NT_023679	AC024450	48403549	1	chr8	NT_023679	AC124298	48511055	3	26084	0	0	26084
S/G/Y/R/B/O	NT_023679	AC024450	48403549	1	chr8	NT_023679	AC023991	48592305	3	22195	0	0	22195
S/G/Y/R/B/O	NT_023679	AC024450	48403549	1	chr8	NT_023679	AC023991	48592305	3	22195	0	0	22195
S/G/Y/R/B/O	NT_023679	AC024450	48403549	1			AC024451	48592305		75800	9846	10087	95733
S/G/Y/R/B/O	NT_023679	AC124298	48511055	3	chr8	NT_023679	AC023991	48592305	3	77188	0	0	77188
S/G/Y/R/B/O	NT_023679	AC124298	48511055	3	chr8	NT_023679	AC084733	48665019	1	21653	0	5231	26884
S/G/Y/R/B/O	NT_023679	AC124298	48511055	3			AC024451	48403549		26872	0	0	26872
S/G/Y/R/B/O	NT_023679	AC023991	48592305	3	chr8	NT_023679	AC084733	48665019	1	71176	6685	6712	84573
S/G/Y/R/B/O	NT_023679	AC023991	48592305	3	chr8	NT_023679	AC024450	48403549	1	22195	0	0	22195
S/G/Y/R/B/O	NT_023679	AC023991	48592305	3	chr8	NT_023679	AC024450	48403549	1	22195	0	0	22195
S/G/Y/R/B/O	NT_023679	AC023991	48592305	3			AC024451	48403549		22818	0	0	22818
S/G/Y/R/B/O	NT_023679	AC023991	48592305	3			AC024451	48403549		22818	0	0	22818
S/G/Y/R/B/O	NT_023679	AC084733	48665019	1	chr8	NT_023679	AC103686	48673321	3	14900	4239	9242	28381
S/G/Y/R/B/O	NT_023679	AC084733	48665019	1	chr8	NT_023679	AC124298	48511055	3	21653	0	5231	26884
S/G/Y/R/B/O	NT_023679	AC103686	48673321	3	chr8	NT_023679	AC021236	48849905	3	30015	0	0	30015
S/G/Y/R/B/O	NT_023679	AC021236	48849905	3	chr8	NT_023679	AC104989	48982145	3	32367	0	0	32367
S/G/Y/R/B/O	NT_023679	AC104989	48982145	3	chr8	NT_023679	AC105029	49131420	2	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC105029	49131420	2	chr8	NT_023679	AC041040	49214755	3	8276	0	0	8276
S/G/Y/R/B/O	NT_023679	AC041040	49214755	3	chr8	NT_023679	AC026904	49370056	3	18133	0	0	18133
S/G/Y/R/B/O	NT_023679	AC026904	49370056	3	chr8	NT_023679	AC022915	49527283	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC022915	49527283	3	chr8	NT_023679	AC100805	49701263	3	0	0	37116	37116
S/G/Y/R/B/O	NT_023679	AC100805	49701263	3	chr8	NT_023679	AC013701	49819966	3	40805	0	0	40805
S/G/Y/R/B/O	NT_023679	AC013701	49819966	3	chr8	NT_023679	AC044893	49939425	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC044893	49939425	3	chr8	NT_023679	AC084841	50071910	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC044893	49939425	3			AC034292	49701263		60127	14496	19477	94100
S/G/Y/R/B/O	NT_023679	AC084841	50071910	3	chr8	NT_023679	AC022568	50108378	3	9481	0	0	9481
S/G/Y/R/B/O	NT_023679	AC084841	50071910	3			AC034292	50108378		19935	10959	0	30894
S/G/Y/R/B/O	NT_023679	AC022568	50108378	3	chr8	NT_023679	AC092698	50236910	2	7663	0	0	7663
S/G/Y/R/B/O	NT_023679	AC092698	50236910	2	chr8	NT_023679	AC091549	50417883	3	19091	0	0	19091
S/G/Y/R/B/O	NT_023679	AC092698	50236910	2			AC021184	50236910		61600	2128	1048	64776
S/G/Y/R/B/O	NT_023679	AC092698	50236910	2			AC021184	50236910		61600	2128	1048	64776
S/G/Y/R/B/O	NT_023679	AC092698	50236910	2			AC068555	50108378		74263	0	30977	105240
S/G/Y/R/B/O	NT_023679	AC092698	50236910	2			AC068555	50108378		74263	0	30977	105240
S/G/Y/R/B/O	NT_023679	AC091549	50417883	3	chr8	NT_023679	AC087713	50597070	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC091549	50417883	3			AC021184	50417883		59103	2478	15107	76688
S/G/Y/R/B/O	NT_023679	AC091549	50417883	3			AC090155	50417883		87072	0	0	87072
S/G/Y/R/B/O	NT_023679	AC087713	50597070	3	chr8	NT_023679	AC113145	50671880	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC087713	50597070	3			AC025746	50236910		19220	0	32219	51439
S/G/Y/R/B/O	NT_023679	AC113145	50671880	3	chr8	NT_023679	AC023762	50758819	3	34188	0	0	34188
S/G/Y/R/B/O	NT_023679	AC113145	50671880	3			AC025746	50758819		12754	0	29334	42088
S/G/Y/R/B/O	NT_023679	AC023762	50758819	3	chr8	NT_023679	AC023405	50845790	3	0	0	41671	41671
S/G/Y/R/B/O	NT_023679	AC023405	50845790	3	chr8	NT_023679	AC103784	50955698	3	131585	0	0	131585
S/G/Y/R/B/O	NT_023679	AC103784	50955698	3	chr8	NT_023679	AC023842	50999858	3	0	0	43718	43718
S/G/Y/R/B/O	NT_023679	AC023842	50999858	3	chr8	NT_023679	AC104376	51143043	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC023842	50999858	3			AC000112	50999858		111000	0	0	111000
S/G/Y/R/B/O	NT_023679	AC104376	51143043	3	chr8	NT_023679	AC090539	51262349	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC104376	51143043	3			AC000112	50955698		15624	0	0	15624
S/G/Y/R/B/O	NT_023679	AC104376	51143043	3			AC018518	50955698		71946	0	0	71946
S/G/Y/R/B/O	NT_023679	AC104376	51143043	3			AC021532	50955698		71305	0	60214	131519
S/G/Y/R/B/O	NT_023679	AC090539	51262349	3	chr8	NT_023679	AC087366	51417886	3	5973	0	0	5973
S/G/Y/R/B/O	NT_023679	AC090539	51262349	3			AC022820	50955698		91458	0	0	91458
S/G/Y/R/B/O	NT_023679	AC087366	51417886	3	chr8	NT_023679	AC087173	51572352	3	48207	0	0	48207
S/G/Y/R/B/O	NT_023679	AC087366	51417886	3			AC022820	51417886		95246	0	0	95246
S/G/Y/R/B/O	NT_023679	AC087366	51417886	3			AC023145	51417886		60272	4173	29617	94062
S/G/Y/R/B/O	NT_023679	AC087366	51417886	3			AC034174	51417886		32654	2298	7539	42491
S/G/Y/R/B/O	NT_023679	AC087173	51572352	3	chr8	NT_023679	AC090450	51684395	3	102083	0	0	102083
S/G/Y/R/B/O	NT_023679	AC087173	51572352	3			AC023145	51262349		27665	0	8419	36084
S/G/Y/R/B/O	NT_023679	AC087173	51572352	3			AC034174	51262349		51465	1537	46710	99712
S/G/Y/R/B/O	NT_023679	AC090450	51684395	3	chr8	NT_023679	AC087272	51748997	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC090450	51684395	3			AC034174	51684395		18811	0	28286	47097
S/G/Y/R/B/O	NT_023679	AC087272	51748997	3	chr8	NT_023679	AC090919	51903679	3	0	0	17423	17423
S/G/Y/R/B/O	NT_023679	AC087272	51748997	3			AC023272	51572352		105487	5260	39965	150712
S/G/Y/R/B/O	NT_023679	AC090919	51903679	3	chr8	NT_023679	AC100862	52070828	3	63216	0	0	63216
S/G/Y/R/B/O	NT_023679	AC090919	51903679	3			AC020553	51903679		160806	0	0	160806
S/G/Y/R/B/O	NT_023679	AC100862	52070828	3	chr8	NT_023679	AC012413	52157003	3	64934	0	0	64934
S/G/Y/R/B/O	NT_023679	AC100862	52070828	3			AC020553	52157003		63218	0	0	63218
S/G/Y/R/B/O	NT_023679	AC012413	52157003	3	chr8	NT_023679	AC011128	52263294	3	5774	0	0	5774
S/G/Y/R/B/O	NT_023679	AC012413	52157003	3			AC103956	52070828		17924	0	0	17924
S/G/Y/R/B/O	NT_023679	AC012413	52157003	3			AF186999	52070828		17923	0	0	17923
S/G/Y/R/B/O	NT_023679	AC011128	52263294	3	chr8	NT_023679	AC107374	52441488	3	17645	0	0	17645
S/G/Y/R/B/O	NT_023679	AC011128	52263294	3			AC103956	52157003		70386	0	0	70386
S/G/Y/R/B/O	NT_023679	AC011128	52263294	3			AF186999	52441488		70382	0	0	70382
S/G/Y/R/B/O	NT_023679	AC011128	52263294	3			AF235105	52441488		17640	0	0	17640
S/G/Y/R/B/O	NT_023679	AC107374	52441488	3	chr8	NT_023679	AC103958	52529126	2	8221	0	0	8221
S/G/Y/R/B/O	NT_023679	AC107374	52441488	3			AF235105	52529126		99709	0	2136	101845
S/G/Y/R/B/O	NT_023679	AC103958	52529126	2	chr8	NT_023679	AC090186	52619265	3	0	0	9097	9097
S/G/Y/R/B/O	NT_023679	AC090186	52619265	3	chr8	NT_023679	AC103769	52763018	3	65294	0	0	65294
S/G/Y/R/B/O	NT_023679	AC090186	52619265	3			AF233070	52529126		64843	2815	650	68308
S/G/Y/R/B/O	NT_023679	AC103769	52763018	3	chr8	NT_023679	AC064807	52835819	3	60632	0	0	60632
S/G/Y/R/B/O	NT_023679	AC103769	52763018	3			AC067932	52835819		60490	0	0	60490
S/G/Y/R/B/O	NT_023679	AC103769	52763018	3			AF233070	52619265		24399	2815	0	27214
S/G/Y/R/B/O	NT_023679	AC064807	52835819	3	chr8	NT_023679	AC009702	52978315	3	56849	0	0	56849
S/G/Y/R/B/O	NT_023679	AC064807	52835819	3			AC023536	52978315		52632	1743	0	54375
S/G/Y/R/B/O	NT_023679	AC064807	52835819	3			AC067932	52978315		163772	0	0	163772
S/G/Y/R/B/O	NT_023679	AC009702	52978315	3	chr8	NT_023679	AC021915	53017500	3	18587	0	0	18587
S/G/Y/R/B/O	NT_023679	AC009702	52978315	3			AC067932	52835819		17603	0	0	17603
S/G/Y/R/B/O	NT_023679	AC021915	53017500	3	chr8	NT_023679	AC103831	53182000	1	49325	0	0	49325
S/G/Y/R/B/O	NT_023679	AC021915	53017500	3			AC011838	52978315		28455	10340	10166	48961
S/G/Y/R/B/O	NT_023679	AC021915	53017500	3			AC023536	52978315		78340	0	0	78340
S/G/Y/R/B/O	NT_023679	AC103831	53182000	1	chr8	NT_023679	AC009995	53206809	3	132173	0	0	132173
S/G/Y/R/B/O	NT_023679	AC103831	53182000	1			AC011838	53206809		55641	10333	58621	124595
S/G/Y/R/B/O	NT_023679	AC103831	53182000	1			AC110055	53017500		57827	0	0	57827
S/G/Y/R/B/O	NT_023679	AC009995	53206809	3	chr8	NT_023679	AC013650	53380846	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC009995	53206809	3			AC021577	53017500		21273	2340	2137	25750
S/G/Y/R/B/O	NT_023679	AC009995	53206809	3			AC110055	53182000		54359	0	0	54359
S/G/Y/R/B/O	NT_023679	AC013650	53380846	3	chr8	NT_023679	AC090814	53508605	3	90140	0	0	90140
S/G/Y/R/B/O	NT_023679	AC090814	53508605	3	chr8	NT_023679	AC113139	53561401	3	17615	0	0	17615
S/G/Y/R/B/O	NT_023679	AC090814	53508605	3			AC018960	53380846		17623	0	0	17623
S/G/Y/R/B/O	NT_023679	AC090814	53508605	3			AC021577	53380846		54687	0	0	54687
S/G/Y/R/B/O	NT_023679	AC113139	53561401	3	chr8	NT_023679	AC087348	53728880	3	0	0	10594	10594
S/G/Y/R/B/O	NT_023679	AC113139	53561401	3			AC018960	53561401		89554	0	39399	128953
S/G/Y/R/B/O	NT_023679	AC113139	53561401	3			AC023126	53561401		11367	2246	5090	18703
S/G/Y/R/B/O	NT_023679	AC087348	53728880	3	chr8	NT_023679	AC009800	53891210	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC087348	53728880	3			AC023126	53508605		49170	6164	20986	76320
S/G/Y/R/B/O	NT_023679	AC009800	53891210	3	chr8	NT_023679	AC016113	53948234	3	55647	0	0	55647
S/G/Y/R/B/O	NT_023679	AC009800	53891210	3			AC023126	53948234		22128	4268	3367	29763
S/G/Y/R/B/O	NT_023679	AC016113	53948234	3	chr8	NT_023679	AC009646	54077860	3	0	0	0	0
S/G/Y/R/B/O	NT_023679	AC009646	54077860	3	chr8	NT_023679	AC131902	54219904	3	43090	0	0	43090
S/G/Y/R/B/O	NT_023679	AC009646	54077860	3			AC083844	53891210		177593	0	0	177593
S/G/Y/R/B/O	NT_023679	AC131902	54219904	3	chr8	NT_023679	AC022034	54314695	3	10977	0	0	10977
S/G/Y/R/B/O	NT_023679	AC131902	54219904	3			AC083844	54314695		44242	0	0	44242
S/G/Y/R/B/O	NT_023679	AC131902	54219904	3			AC083844	54314695		44242	0	0	44242
S/G/Y/R/B/O	NT_023679	AC022034	54314695	3