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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_008186 | AC062004 | 78296835 | 3 | chr8 | NT_008186 | AC037492 | 78502481 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC062004 | 78296835 | 3 |   |   | AC024699 | 78169945 | | 77294 | 0 | 0 | 77294 |
S/G/Y/R/B/O |
NT_008186 | AC037492 | 78502481 | 3 | chr8 | NT_008186 | AC068466 | 78656118 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC037492 | 78502481 | 3 |   |   | AC024699 | 78169945 | | 29921 | 0 | 0 | 29921 |
S/G/Y/R/B/O |
NT_008186 | AC037492 | 78502481 | 3 |   |   | AC087344 | 78169945 | | 71311 | 0 | 0 | 71311 |
S/G/Y/R/B/O |
NT_008186 | AC068466 | 78656118 | 3 | chr8 | NT_008186 | AC023916 | 78808514 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC023916 | 78808514 | 3 | chr8 | NT_008186 | AC104580 | 78936539 | 3 | 55595 | 0 | 0 | 55595 |
S/G/Y/R/B/O |
NT_008186 | AC104580 | 78936539 | 3 | chr8 | NT_008186 | AC022828 | 79060085 | 3 | 78405 | 0 | 0 | 78405 |
S/G/Y/R/B/O |
NT_008186 | AC104580 | 78936539 | 3 | chr8 | NT_008186 | AC084706 | 79118963 | 3 | 27119 | 0 | 0 | 27119 |
S/G/Y/R/B/O |
NT_008186 | AC022828 | 79060085 | 3 | chr8 | NT_008186 | AC084706 | 79118963 | 3 | 85976 | 0 | 0 | 85976 |
S/G/Y/R/B/O |
NT_008186 | AC084706 | 79118963 | 3 | chr8 | NT_008186 | AC087694 | 79179768 | 3 | 13873 | 0 | 0 | 13873 |
S/G/Y/R/B/O |
NT_008186 | AC084706 | 79118963 | 3 | chr8 | NT_008186 | AC104580 | 78936539 | 3 | 27119 | 0 | 0 | 27119 |
S/G/Y/R/B/O |
NT_008186 | AC084706 | 79118963 | 3 |   |   | AC011002 | 78936539 | | 13873 | 0 | 0 | 13873 |
S/G/Y/R/B/O |
NT_008186 | AC084706 | 79118963 | 3 |   |   | AC068873 | 79060085 | | 41899 | 0 | 0 | 41899 |
S/G/Y/R/B/O |
NT_008186 | AC087694 | 79179768 | 3 | chr8 | NT_008186 | AC090733 | 79318713 | 3 | 41793 | 0 | 0 | 41793 |
S/G/Y/R/B/O |
NT_008186 | AC087694 | 79179768 | 3 |   |   | AC011002 | 78936539 | | 77732 | 0 | 0 | 77732 |
S/G/Y/R/B/O |
NT_008186 | AC087694 | 79179768 | 3 |   |   | AC068873 | 78936539 | | 131316 | 0 | 0 | 131316 |
S/G/Y/R/B/O |
NT_008186 | AC090733 | 79318713 | 3 | chr8 | NT_008186 | AC068700 | 79442375 | 3 | 22302 | 0 | 0 | 22302 |
S/G/Y/R/B/O |
NT_008186 | AC090733 | 79318713 | 3 |   |   | AC011002 | 79318713 | | 41787 | 0 | 0 | 41787 |
S/G/Y/R/B/O |
NT_008186 | AC090733 | 79318713 | 3 |   |   | AC068873 | 79442375 | | 20419 | 0 | 0 | 20419 |
S/G/Y/R/B/O |
NT_008186 | AC068700 | 79442375 | 3 | chr8 | NT_008186 | AC100854 | 79602856 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC068700 | 79442375 | 3 |   |   | AC023138 | 79179768 | | 86049 | 5443 | 0 | 91492 |
S/G/Y/R/B/O |
NT_008186 | AC100854 | 79602856 | 3 | chr8 | NT_008186 | AC083837 | 79674654 | 3 | 15332 | 0 | 0 | 15332 |
S/G/Y/R/B/O |
NT_008186 | AC100854 | 79602856 | 3 |   |   | AC023138 | 79318713 | | 86412 | 7136 | 0 | 93548 |
S/G/Y/R/B/O |
NT_008186 | AC083837 | 79674654 | 3 | chr8 | NT_008186 | AC016031 | 79825409 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC083837 | 79674654 | 3 |   |   | AC023138 | 79674654 | | 16383 | 0 | 0 | 16383 |
S/G/Y/R/B/O |
NT_008186 | AC016031 | 79825409 | 3 | chr8 | NT_008186 | AC009941 | 79894284 | 3 | 13272 | 0 | 0 | 13272 |
S/G/Y/R/B/O |
NT_008186 | AC016031 | 79825409 | 3 |   |   | AC013566 | 79894284 | | 58418 | 0 | 0 | 58418 |
S/G/Y/R/B/O |
NT_008186 | AC016031 | 79825409 | 3 |   |   | AC015480 | 79894284 | | 77198 | 0 | 0 | 77198 |
S/G/Y/R/B/O |
NT_008186 | AC016031 | 79825409 | 3 |   |   | AC016417 | 79894284 | | 133928 | 0 | 0 | 133928 |
S/G/Y/R/B/O |
NT_008186 | AC016031 | 79825409 | 3 |   |   | AC048363 | 79894284 | | 105893 | 0 | 0 | 105893 |
S/G/Y/R/B/O |
NT_008186 | AC009941 | 79894284 | 3 | chr8 | NT_008186 | AC079071 | 80049840 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_008186 | AC009941 | 79894284 | 3 |   |   | AC013566 | 79894284 | | 51767 | 0 | 0 | 51767 |
S/G/Y/R/B/O |
NT_008186 | AC009941 | 79894284 | 3 |   |   | AC021796 | 79825409 | | 96101 | 0 | 1478 | 97579 |
S/G/Y/R/B/O |
NT_008186 | AC009941 | 79894284 | 3 |   |   | AC092457 | 79825409 | | 91057 | 0 | 0 | 91057 |
S/G/Y/R/B/O |
NT_008186 | AC009941 | 79894284 | 3 |   |   | AL158085 | 79825409 | | 54913 | 0 | 16746 | 71659 |
S/G/Y/R/B/O |
NT_008186 | AC079071 | 80049840 | 3 | chr8 | NT_008186 | AC021482 | 80198824 | 3 | 73370 | 0 | 0 | 73370 |
S/G/Y/R/B/O |
NT_008186 | AC079071 | 80049840 | 3 |   |   | AC021796 | 80198824 | | 28419 | 1714 | 0 | 30133 |
S/G/Y/R/B/O |
NT_008186 | AC079071 | 80049840 | 3 |   |   | AC068972 | 80198824 | | 18935 | 0 | 0 | 18935 |
S/G/Y/R/B/O |
NT_008186 | AC079071 | 80049840 | 3 |   |   | AC090035 | 80198824 | | 135679 | 0 | 0 | 135679 |
S/G/Y/R/B/O |
NT_008186 | AC021482 | 80198824 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_008186 | AC021482 | 80198824 | 3 |   |   | AC068972 | 80198824 | | 63612 | 0 | 39928 | 103540 |
S/G/Y/R/B/O |
NT_008186 | AC021482 | 80198824 | 3 |   |   | AC090035 | 80049840 | | 102705 | 0 | 0 | 102705 |
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