Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_008251

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_008251	AC098964	34176045	3	chr8	NT_008251	AC103840	34233404	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AC103840	34233404	3	chr8	NT_008251	AC087671	34405765	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AC103840	34233404	3	chr8	NT_008251	AC087855	34498424	3	60121	0	0	60121
S/G/Y/R/B/O	NT_008251	AC087671	34405765	3	chr8	NT_008251	AC087855	34498424	3	152490	0	0	152490
S/G/Y/R/B/O	NT_008251	AC087671	34405765	3			AC025546	34498424		64578	0	8083	72661
S/G/Y/R/B/O	NT_008251	AC087855	34498424	3	chr8	NT_008251	AC090993	34506840	3	9021	0	0	9021
S/G/Y/R/B/O	NT_008251	AC087855	34498424	3	chr8	NT_008251	AC103840	34233404	3	60121	0	0	60121
S/G/Y/R/B/O	NT_008251	AC087855	34498424	3			AC025546	34506840		64766	0	8108	72874
S/G/Y/R/B/O	NT_008251	AC087855	34498424	3			AF286884	34233404		152485	0	0	152485
S/G/Y/R/B/O	NT_008251	AC090993	34506840	3	chr8	NT_008251	AC083963	34588427	3	65749	0	0	65749
S/G/Y/R/B/O	NT_008251	AC090993	34506840	3	chr8	NT_008251	AC021235	34668892	1	39836	0	0	39836
S/G/Y/R/B/O	NT_008251	AC090993	34506840	3			AF230637	34498424		90617	0	0	90617
S/G/Y/R/B/O	NT_008251	AC083963	34588427	3	chr8	NT_008251	AC021235	34668892	1	35682	0	0	35682
S/G/Y/R/B/O	NT_008251	AC083963	34588427	3			AF230637	34506840		65746	0	0	65746
S/G/Y/R/B/O	NT_008251	AC021235	34668892	1	chr8	NT_008251	AC016412	34700359	3	0	0	44955	44955
S/G/Y/R/B/O	NT_008251	AC021235	34668892	1	chr8	NT_008251	AC090993	34506840	3	39836	0	0	39836
S/G/Y/R/B/O	NT_008251	AC021235	34668892	1			AF230637	34506840		39834	0	0	39834
S/G/Y/R/B/O	NT_008251	AC016412	34700359	3	chr8	NT_008251	AC090274	34831710	3	0	0	10564	10564
S/G/Y/R/B/O	NT_008251	AC090274	34831710	3	chr8	NT_008251	AC090097	34997893	3	78818	0	0	78818
S/G/Y/R/B/O	NT_008251	AC090274	34831710	3			AC084260	34700359		14183	0	0	14183
S/G/Y/R/B/O	NT_008251	AC090274	34831710	3			AF280813	34997893		176882	0	0	176882
S/G/Y/R/B/O	NT_008251	AC090097	34997893	3	chr8	NT_008251	AC087170	35090033	3	74745	0	0	74745
S/G/Y/R/B/O	NT_008251	AC090097	34997893	3			AC069386	34997893		43375	0	3718	47093
S/G/Y/R/B/O	NT_008251	AC090097	34997893	3			AF280813	34831710		78818	0	0	78818
S/G/Y/R/B/O	NT_008251	AC087170	35090033	3	chr8	NT_008251	AC087343	35187724	3	0	0	9322	9322
S/G/Y/R/B/O	NT_008251	AC087170	35090033	3			AC069136	34831710		70624	4581	6997	82202
S/G/Y/R/B/O	NT_008251	AC087170	35090033	3			AC069386	34831710		108433	0	34095	142528
S/G/Y/R/B/O	NT_008251	AC087343	35187724	3	chr8	NT_008251	AC098612	35232571	3	5146	0	0	5146
S/G/Y/R/B/O	NT_008251	AC087343	35187724	3			AC069136	34997893		24504	0	1719	26223
S/G/Y/R/B/O	NT_008251	AC098612	35232571	3	chr8	NT_008251	AC102942	35284746	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AC098612	35232571	3			AC069136	35232571		42363	2201	0	44564
S/G/Y/R/B/O	NT_008251	AC102942	35284746	3	chr8	NT_008251	AC099685	35386366	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AC102942	35284746	3			AF306443	35187724		101616	0	0	101616
S/G/Y/R/B/O	NT_008251	AC099685	35386366	3	chr8	NT_008251	AC090740	35557373	3	0	1765	0	1765
S/G/Y/R/B/O	NT_008251	AC099685	35386366	3			AC018704	35187724		140855	8767	5452	155074
S/G/Y/R/B/O	NT_008251	AC099685	35386366	3			AC104320	35557373		45439	0	0	45439
S/G/Y/R/B/O	NT_008251	AC090740	35557373	3	chr8	NT_008251	AC104049	35740445	3	79244	0	0	79244
S/G/Y/R/B/O	NT_008251	AC090740	35557373	3			AC074199	35557373		85234	8833	58711	152778
S/G/Y/R/B/O	NT_008251	AC090740	35557373	3			AC104320	35740445		90011	0	0	90011
S/G/Y/R/B/O	NT_008251	AC090740	35557373	3			AF282855	35740445		65905	2342	0	68247
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3	chr8	NT_008251	AC013302	35790998	3	8223	0	0	8223
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AC016275	35790998		34182	0	0	34182
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AC016340	35790998		30891	2118	731	33740
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AC074199	35790998		23146	3916	48020	75082
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AC084129	35790998		37296	0	0	37296
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AC129984	35557373		51865	0	0	51865
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AF216808	35557373		51865	0	0	51865
S/G/Y/R/B/O	NT_008251	AC104049	35740445	3			AF282855	35557373		17018	2342	0	19360
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3	chr8	NT_008251	AC105230	35890487	3	53924	0	0	53924
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AC016275	35557373		120636	0	0	120636
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AC016340	35557373		89797	0	10153	99950
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AC084129	35557373		69464	0	0	69464
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AC090705	35557373		17721	0	0	17721
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AC129984	35890487		40885	0	72175	113060
S/G/Y/R/B/O	NT_008251	AC013302	35790998	3			AF216808	35890487		161640	0	0	161640
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3	chr8	NT_008251	AC012215	36042004	3	71426	0	0	71426
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3			AC016275	35790998		13117	0	0	13117
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3			AC016340	35790998		13117	0	0	13117
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3			AC087809	35790998		97487	0	1244	98731
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3			AC090705	35790998		56287	2726	1337	60350
S/G/Y/R/B/O	NT_008251	AC105230	35890487	3			AF216808	144946911		63935	0	0	63935
S/G/Y/R/B/O	NT_008251	AC012215	36042004	3	chr8	NT_008251	AC100818	36181301	3	0	0	41961	41961
S/G/Y/R/B/O	NT_008251	AC012215	36042004	3			AC087809	144946911		134219	0	0	134219
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3	chr8	NT_008251	AP000083	36318032	3	58944	0	0	58944
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3			AC083838	36042004		58662	0	0	58662
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3			AC124265	36042004		43025	0	0	43025
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3			AC124265	36042004		43025	0	0	43025
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3			AF161801	36042004		137602	0	0	137602
S/G/Y/R/B/O	NT_008251	AC100818	36181301	3			AF252832	36042004		43026	0	0	43026
S/G/Y/R/B/O	NT_008251	AP000083	36318032	3	chr8	NT_008251	AP000082	36361458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000083	36318032	3			AF161801	36181301		59631	0	0	59631
S/G/Y/R/B/O	NT_008251	AP000082	36361458	3	chr8	NT_008251	AP000081	36461458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000082	36361458	3			AC124265	36181301		52705	0	0	52705
S/G/Y/R/B/O	NT_008251	AP000082	36361458	3			AC124265	36181301		52705	0	0	52705
S/G/Y/R/B/O	NT_008251	AP000081	36461458	3	chr8	NT_008251	AP000080	36561458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000081	36461458	3			AC124073	36181301		28311	0	3429	31740
S/G/Y/R/B/O	NT_008251	AP000081	36461458	3			AC124073	36181301		28311	0	3429	31740
S/G/Y/R/B/O	NT_008251	AP000081	36461458	3			AL355484	36181301		44546	0	0	44546
S/G/Y/R/B/O	NT_008251	AP000080	36561458	3	chr8	NT_008251	AP000079	36661458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000080	36561458	3			AC124073	36181301		30322	0	15736	46058
S/G/Y/R/B/O	NT_008251	AP000080	36561458	3			AC124073	36181301		30322	0	15736	46058
S/G/Y/R/B/O	NT_008251	AP000080	36561458	3			AL355484	36181301		31279	0	0	31279
S/G/Y/R/B/O	NT_008251	AP000079	36661458	3	chr8	NT_008251	AP000078	36761458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000079	36661458	3			AC079009	36181301		61331	0	0	61331
S/G/Y/R/B/O	NT_008251	AP000079	36661458	3			AC079087	36181301		43268	0	0	43268
S/G/Y/R/B/O	NT_008251	AP000079	36661458	3			AL355484	36181301		26182	0	4310	30492
S/G/Y/R/B/O	NT_008251	AP000078	36761458	3	chr8	NT_008251	AP000077	36861458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000078	36761458	3			AC079009	36181301		91884	0	0	91884
S/G/Y/R/B/O	NT_008251	AP000078	36761458	3			AC079087	36181301		64069	1987	0	66056
S/G/Y/R/B/O	NT_008251	AP000077	36861458	3	chr8	NT_008251	AP000076	36961458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000077	36861458	3			AC084308	36181301		52334	0	0	52334
S/G/Y/R/B/O	NT_008251	AP000077	36861458	3			AC084308	36181301		52334	0	0	52334
S/G/Y/R/B/O	NT_008251	AP000077	36861458	3			AC090809	36181301		89630	0	0	89630
S/G/Y/R/B/O	NT_008251	AP000077	36861458	3			AC090809	36181301		89630	0	0	89630
S/G/Y/R/B/O	NT_008251	AP000076	36961458	3	chr8	NT_008251	AP000075	37061458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000076	36961458	3			AC124076	36181301		71493	0	0	71493
S/G/Y/R/B/O	NT_008251	AP000076	36961458	3			AC124076	36181301		71493	0	0	71493
S/G/Y/R/B/O	NT_008251	AP000075	37061458	3	chr8	NT_008251	AP000074	37161458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000075	37061458	3			AC124076	36181301		34321	0	64664	98985
S/G/Y/R/B/O	NT_008251	AP000075	37061458	3			AC124076	36181301		34321	0	64664	98985
S/G/Y/R/B/O	NT_008251	AP000074	37161458	3	chr8	NT_008251	AP000073	37261458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000073	37261458	3	chr8	NT_008251	AP000072	37361458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000073	37261458	3			AC092818	36181301		78044	0	0	78044
S/G/Y/R/B/O	NT_008251	AP000073	37261458	3			AC092818	36181301		78044	0	0	78044
S/G/Y/R/B/O	NT_008251	AP000072	37361458	3	chr8	NT_008251	AP000071	37461458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000072	37361458	3			AC092818	36181301		96233	0	0	96233
S/G/Y/R/B/O	NT_008251	AP000072	37361458	3			AC092818	36181301		96233	0	0	96233
S/G/Y/R/B/O	NT_008251	AP000071	37461458	3	chr8	NT_008251	AP000070	37561458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000071	37461458	3			AC044817	36181301		20319	0	0	20319
S/G/Y/R/B/O	NT_008251	AP000071	37461458	3			AC068207	36181301		98611	0	0	98611
S/G/Y/R/B/O	NT_008251	AP000071	37461458	3			AC074192	36181301		13164	0	17633	30797
S/G/Y/R/B/O	NT_008251	AP000070	37561458	3	chr8	NT_008251	AP000069	37661458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000070	37561458	3			AC068207	36181301		38139	0	0	38139
S/G/Y/R/B/O	NT_008251	AP000070	37561458	3			AC074192	36181301		33227	3561	44974	81762
S/G/Y/R/B/O	NT_008251	AP000069	37661458	3	chr8	NT_008251	AP000068	37761458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000069	37661458	3			AC007590	36181301		86133	0	0	86133
S/G/Y/R/B/O	NT_008251	AP000069	37661458	3			AC074192	36181301		47101	0	20148	67249
S/G/Y/R/B/O	NT_008251	AP000069	37661458	3			AC091182	36181301		70521	0	0	70521
S/G/Y/R/B/O	NT_008251	AP000069	37661458	3			AC091182	36181301		70521	0	0	70521
S/G/Y/R/B/O	NT_008251	AP000068	37761458	3	chr8	NT_008251	AP000067	37861458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000068	37761458	3			AC084847	36181301		20401	0	0	20401
S/G/Y/R/B/O	NT_008251	AP000068	37761458	3			AC124067	36181301		98225	0	0	98225
S/G/Y/R/B/O	NT_008251	AP000068	37761458	3			AC124067	36181301		98225	0	0	98225
S/G/Y/R/B/O	NT_008251	AP000067	37861458	3	chr8	NT_008251	AP000066	37961458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000067	37861458	3			AC084847	36181301		83248	0	0	83248
S/G/Y/R/B/O	NT_008251	AP000067	37861458	3			AC124067	36181301		58781	0	0	58781
S/G/Y/R/B/O	NT_008251	AP000067	37861458	3			AC124067	36181301		58781	0	0	58781
S/G/Y/R/B/O	NT_008251	AP000066	37961458	3	chr8	NT_008251	AP000065	38061458	3	0	0	0	0
S/G/Y/R/B/O	NT_008251	AP000065	38061458	3	chr8	NT_008251	AC084024	38161458	3	60617	0	0	60617
S/G/Y/R/B/O	NT_008251	AC084024	38161458	3	chr8	NT_008251	AC087362	38236136	3	9994	0	34260	44254
S/G/Y/R/B/O	NT_008251	AC084024	38161458	3			AC007626	38161458		61632	0	0	61632
S/G/Y/R/B/O	NT_008251	AC084024	38161458	3			AC024242	38161458		18327	587	5538	24452
S/G/Y/R/B/O	NT_008251	AC084024	38161458	3			AC084124	38161458		10128	2633	1322	14083
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3	chr8	NT_008251	AC087623	38298766	2	0	0	69318	69318
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC011237	38061458		39686	0	10275	49961
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC011237	38061458		39686	0	10275	49961
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC024242	38061458		83745	2117	14067	99929
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC024242	38061458		83745	2117	14067	99929
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC084124	38161458		73927	3625	1322	78874
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC084124	38161458		73927	3625	1322	78874
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC090129	38298766		85715	1703	9934	97352
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AC090129	38298766		85715	1703	9934	97352
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AF214633	38298766		99639	0	11005	110644
S/G/Y/R/B/O	NT_008251	AC087362	38236136	3			AF214633	38298766		99639	0	11005	110644
S/G/Y/R/B/O	NT_008251	AC087623	38298766	2