Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_023666

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2	chr8	NT_023666	AC087363	21996152	3	89536	0	2255	91791
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC022270	21566566		34609	4408	27957	66974
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC022270	21566566		34609	4408	27957	66974
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC090442	21996152		14094	0	2269	16363
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC090442	21996152		14094	0	2269	16363
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC090471	21996152		13903	0	2261	16164
S/G/Y/R/B/O	NT_023666	AC129925	21979164	2			AC090471	21996152		13903	0	2261	16164
S/G/Y/R/B/O	NT_023666	AC087363	21996152	3	chr8	NT_023666	AC091171	22170180	1	0	0	1676	1676
S/G/Y/R/B/O	NT_023666	AC087363	21996152	3			AC022270	21996152		48474	11784	53823	114081
S/G/Y/R/B/O	NT_023666	AC087363	21996152	3			AC090442	21996152		80104	0	819	80923
S/G/Y/R/B/O	NT_023666	AC087363	21996152	3			AC090471	21996152		51649	0	1860	53509
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1	chr8	NT_023666	AC105206	22279068	3	38779	0	0	38779
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC023288	21979164		51361	0	92642	144003
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC023288	21979164		51361	0	92642	144003
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC087819	21996152		140832	4656	8623	154111
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC087819	21996152		140832	4656	8623	154111
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC090442	21996152		38722	770	22122	61614
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC090442	21996152		38722	770	22122	61614
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC090471	21996152		71885	0	24473	96358
S/G/Y/R/B/O	NT_023666	AC091171	22170180	1			AC090471	21996152		71885	0	24473	96358
S/G/Y/R/B/O	NT_023666	AC105206	22279068	3	chr8	NT_023666	AC105910	22497999	3	71357	0	0	71357
S/G/Y/R/B/O	NT_023666	AC105206	22279068	3			AC023288	22279068		24348	0	11851	36199
S/G/Y/R/B/O	NT_023666	AC105206	22279068	3			AC087819	22279068		37891	0	1061	38952
S/G/Y/R/B/O	NT_023666	AC105206	22279068	3			AC105141	22170180		130529	0	0	130529
S/G/Y/R/B/O	NT_023666	AC105910	22497999	3	chr8	NT_023666	AC087854	22617477	3	39786	0	19534	59320
S/G/Y/R/B/O	NT_023666	AC105910	22497999	3			AC018736	22497999		22421	10074	9186	41681
S/G/Y/R/B/O	NT_023666	AC105910	22497999	3			AC105141	22617477		78771	0	0	78771
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3	chr8	NT_023666	AC037459	22703882	2	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3			AC018736	22279068		47007	10086	78033	135126
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3			AC022930	22279068		76893	0	0	76893
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3			AC069217	22279068		15549	4476	40564	60589
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3			AC090279	22279068		14698	0	0	14698
S/G/Y/R/B/O	NT_023666	AC087854	22617477	3			AF238376	22497999		31599	0	0	31599
S/G/Y/R/B/O	NT_023666	AC037459	22703882	2	chr8	NT_023666	AC105046	22848896	2	15836	0	0	15836
S/G/Y/R/B/O	NT_023666	AC037459	22703882	2			AC022930	22497999		80899	0	0	80899
S/G/Y/R/B/O	NT_023666	AC037459	22703882	2			AC069217	83889638		29729	0	2430	32159
S/G/Y/R/B/O	NT_023666	AC037459	22703882	2			AC090279	83889638		46745	0	16049	62794
S/G/Y/R/B/O	NT_023666	AC037459	22703882	2			AF238376	22848896		43532	0	29025	72557
S/G/Y/R/B/O	NT_023666	AC105046	22848896	2	chr8	NT_023666	AC055854	22920640	3	32379	0	0	32379
S/G/Y/R/B/O	NT_023666	AC055854	22920640	3	chr8	NT_023666	AC037441	22979660	3	0	0	63099	63099
S/G/Y/R/B/O	NT_023666	AC037441	22979660	3	chr8	NT_023666	AC007868	23142807	3	0	698	0	698
S/G/Y/R/B/O	NT_023666	AC037441	22979660	3			AC084081	22920640		64845	0	434	65279
S/G/Y/R/B/O	NT_023666	AC037441	22979660	3			AC134389	22920640		47944	0	0	47944
S/G/Y/R/B/O	NT_023666	AC037441	22979660	3			AC134389	22920640		47944	0	0	47944
S/G/Y/R/B/O	NT_023666	AC007868	23142807	3	chr8	NT_023666	AC107959	23231929	3	0	0	82540	82540
S/G/Y/R/B/O	NT_023666	AC007868	23142807	3			AC084081	22979660		50789	0	38139	88928
S/G/Y/R/B/O	NT_023666	AC007868	23142807	3			AC134389	23231929		23996	0	0	23996
S/G/Y/R/B/O	NT_023666	AC007868	23142807	3			AC134389	23231929		23996	0	0	23996
S/G/Y/R/B/O	NT_023666	AC107959	23231929	3	chr8	NT_023666	AC100861	23326164	3	33928	0	0	33928
S/G/Y/R/B/O	NT_023666	AC107959	23231929	3			AC084081	23142807		72726	0	13964	86690
S/G/Y/R/B/O	NT_023666	AC107959	23231929	3			AC084081	23142807		72726	0	13964	86690
S/G/Y/R/B/O	NT_023666	AC100861	23326164	3	chr8	NT_023666	AC090197	23490856	2	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC090197	23490856	2	chr8	NT_023666	AC104561	23580945	3	0	3273	0	3273
S/G/Y/R/B/O	NT_023666	AC090197	23490856	2			AF279339	23580945		101265	1525	13825	116615
S/G/Y/R/B/O	NT_023666	AC090197	23490856	2			AF279339	23580945		101265	1525	13825	116615
S/G/Y/R/B/O	NT_023666	AC104561	23580945	3	chr8	NT_023666	AC051642	23736311	3	17982	0	0	17982
S/G/Y/R/B/O	NT_023666	AC104561	23580945	3			AF191252	23490856		85864	2487	21331	109682
S/G/Y/R/B/O	NT_023666	AC104561	23580945	3			AF216674	23490856		19829	0	19761	39590
S/G/Y/R/B/O	NT_023666	AC051642	23736311	3	chr8	NT_023666	AC012574	23892760	3	11813	0	0	11813
S/G/Y/R/B/O	NT_023666	AC051642	23736311	3			AC022597	23892760		111965	1664	0	113629
S/G/Y/R/B/O	NT_023666	AC051642	23736311	3			AF191252	23580945		15489	2476	0	17965
S/G/Y/R/B/O	NT_023666	AC051642	23736311	3			AF216674	23580945		33318	4984	10854	49156
S/G/Y/R/B/O	NT_023666	AC012574	23892760	3	chr8	NT_023666	AC012119	23961533	3	5967	0	0	5967
S/G/Y/R/B/O	NT_023666	AC012574	23892760	3			AC022597	23961533		26215	0	16147	42362
S/G/Y/R/B/O	NT_023666	AC012119	23961533	3	chr8	NT_023666	AC091194	24110300	3	24112	0	0	24112
S/G/Y/R/B/O	NT_023666	AC012119	23961533	3			AC074394	23892760		11218	0	10918	22136
S/G/Y/R/B/O	NT_023666	AC091194	24110300	3	chr8	NT_023666	AC023202	24287509	3	49581	0	0	49581
S/G/Y/R/B/O	NT_023666	AC091194	24110300	3			AC044895	24287509		123246	7497	16419	147162
S/G/Y/R/B/O	NT_023666	AC091194	24110300	3			AC074394	24287509		60465	6679	23053	90197
S/G/Y/R/B/O	NT_023666	AC023202	24287509	3	chr8	NT_023666	AC044891	24399375	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC044891	24399375	3	chr8	NT_023666	AC120193	24541876	3	33736	0	0	33736
S/G/Y/R/B/O	NT_023666	AC044891	24399375	3			AC011817	24110300		20331	16037	13878	50246
S/G/Y/R/B/O	NT_023666	AC120193	24541876	3	chr8	NT_023666	AC024958	24682696	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC024958	24682696	3	chr8	NT_023666	AC018422	24766987	3	64643	0	0	64643
S/G/Y/R/B/O	NT_023666	AC024958	24682696	3			AC136591	24766987		80893	0	0	80893
S/G/Y/R/B/O	NT_023666	AC018422	24766987	3	chr8	NT_023666	AC084091	24859851	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC018422	24766987	3			AC079972	24682696		36789	0	0	36789
S/G/Y/R/B/O	NT_023666	AC018422	24766987	3			AC136591	24682696		91217	0	24432	115649
S/G/Y/R/B/O	NT_023666	AC084091	24859851	3	chr8	NT_023666	AF106564	25017140	3	6174	0	0	6174
S/G/Y/R/B/O	NT_023666	AC084091	24859851	3			AC021000	24682696		59963	0	0	59963
S/G/Y/R/B/O	NT_023666	AC084091	24859851	3			AC079972	24682696		104347	2917	0	107264
S/G/Y/R/B/O	NT_023666	AF106564	25017140	3	chr8	NT_023666	AC105359	25154189	3	90250	0	0	90250
S/G/Y/R/B/O	NT_023666	AF106564	25017140	3			AC021000	25017140		138456	0	0	138456
S/G/Y/R/B/O	NT_023666	AF106564	25017140	3			AC084126	24859851		122276	1011	0	123287
S/G/Y/R/B/O	NT_023666	AF106564	25017140	3			AF260013	25185707		47676	7092	14395	69163
S/G/Y/R/B/O	NT_023666	AC105359	25154189	3	chr8	NT_023666	AC107373	25185707	3	38030	0	0	38030
S/G/Y/R/B/O	NT_023666	AC105359	25154189	3			AC021000	25185707		85693	0	0	85693
S/G/Y/R/B/O	NT_023666	AC105359	25154189	3			AC084126	25185707		121615	0	0	121615
S/G/Y/R/B/O	NT_023666	AC105359	25154189	3			AF176680	25017140		32197	0	1775	33972
S/G/Y/R/B/O	NT_023666	AC105359	25154189	3			AF260013	25017140		72181	7100	19619	98900
S/G/Y/R/B/O	NT_023666	AC107373	25185707	3	chr8	NT_023666	AC073581	25228249	3	19980	0	0	19980
S/G/Y/R/B/O	NT_023666	AC107373	25185707	3			AC084126	25228249		52743	2098	0	54841
S/G/Y/R/B/O	NT_023666	AC107373	25185707	3			AF176680	25017140		50697	0	25644	76341
S/G/Y/R/B/O	NT_023666	AC107373	25185707	3			AF260013	25017140		24363	1631	7972	33966
S/G/Y/R/B/O	NT_023666	AC073581	25228249	3	chr8	NT_023666	AC041005	25384746	3	14901	0	0	14901
S/G/Y/R/B/O	NT_023666	AC073581	25228249	3			AF267908	25185707		62364	4101	0	66465
S/G/Y/R/B/O	NT_023666	AC041005	25384746	3	chr8	NT_023666	AC091185	25457316	3	8617	0	0	8617
S/G/Y/R/B/O	NT_023666	AC041005	25384746	3			AC090104	25228249		42200	0	0	42200
S/G/Y/R/B/O	NT_023666	AC041005	25384746	3			AF267908	25457316		24395	7512	0	31907
S/G/Y/R/B/O	NT_023666	AC091185	25457316	3	chr8	NT_023666	AC103779	25637713	3	15158	0	0	15158
S/G/Y/R/B/O	NT_023666	AC091185	25457316	3			AC027630	25457316		54183	1486	16371	72040
S/G/Y/R/B/O	NT_023666	AC091185	25457316	3			AC079783	25384746		98588	8636	54031	161255
S/G/Y/R/B/O	NT_023666	AC091185	25457316	3			AC090104	25384746		76004	0	51678	127682
S/G/Y/R/B/O	NT_023666	AC103779	25637713	3	chr8	NT_023666	AC104562	25738237	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC103779	25637713	3			AC027630	25637713		54031	5713	46115	105859
S/G/Y/R/B/O	NT_023666	AC103779	25637713	3			AC079783	25637713		14141	0	0	14141
S/G/Y/R/B/O	NT_023666	AC104562	25738237	3	chr8	NT_023666	AC087755	25795116	3	17303	0	0	17303
S/G/Y/R/B/O	NT_023666	AC104562	25738237	3			AF263550	25795116		108537	0	0	108537
S/G/Y/R/B/O	NT_023666	AC087755	25795116	3	chr8	NT_023666	AC009623	25852440	3	10661	0	0	10661
S/G/Y/R/B/O	NT_023666	AC087755	25795116	3			AF263550	25738237		17302	0	0	17302
S/G/Y/R/B/O	NT_023666	AC009623	25852440	3	chr8	NT_023666	AC090103	26038712	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC090103	26038712	3	chr8	NT_023666	AC023566	26123548	3	56689	0	0	56689
S/G/Y/R/B/O	NT_023666	AC090103	26038712	3			AC080043	26123548		83146	0	0	83146
S/G/Y/R/B/O	NT_023666	AC023566	26123548	3	chr8	NT_023666	AC113186	26308091	3	0	0	0	0
S/G/Y/R/B/O	NT_023666	AC023566	26123548	3			AC080043	26123548		134671	0	0	134671
S/G/Y/R/B/O	NT_023666	AC113186	26308091	3	chr8	NT_023666	AC079097	26367626	3	59215	0	0	59215
S/G/Y/R/B/O	NT_023666	AC113186	26308091	3			AF172273	26367626		36954	0	6286	43240
S/G/Y/R/B/O	NT_023666	AC079097	26367626	3	chr8	NT_023666	AC022911	26456053	3	30076	0	0	30076
S/G/Y/R/B/O	NT_023666	AC079097	26367626	3			AF172273	26308091		39724	0	45796	85520
S/G/Y/R/B/O	NT_023666	AC022911	26456053	3	chr8	NT_023666	AC011726	26613160	3	109118	0	0	109118
S/G/Y/R/B/O	NT_023666	AC011726	26613160	3	chr8	NT_023666	AC015743	26674114	3	14812	0	0	14812
S/G/Y/R/B/O	NT_023666	AC015743	26674114	3
S/G/Y/R/B/O	NT_023666	AC015743	26674114	3	chr8	NT_007988	AC015564	26863117	3	78969	0	0	78969