Chromosome 8 - Clone Overlaps

Chromosome 8 - Clone Overlaps - Single Contig

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037693	NT_008060	NT_037694	NT_023744	NT_037695	NT_023736	NT_019483	NT_015280
NT_030737	NT_034940	NT_008205	NT_023666	NT_007988	NT_007995	NT_008251	NT_008045
NT_008176	NT_037696	NT_023678	NT_037697	NT_023679	NT_008183	NT_008055	NT_008186
NT_008292	NT_034897	NT_034898	NT_008046	NT_023811	NT_023663	NT_008023	NT_008150
NT_025796	NT_028251	NT_008104	NT_034901	NT_027068	NT_037698	NT_030032	NT_037699
NT_033192	NT_037700	NT_008127	NT_037701	NT_037702	NT_023684	NT_037703	NT_037704
NT_031818

NT_023811

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_023811	AP004581	112004769	3	chr8	NT_023811	AC009930	112093057	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC009930	112093057	3	chr8	NT_023811	AP002980	112258719	3	39073	0	0	39073
S/G/Y/R/B/O	NT_023811	AP002980	112258719	3	chr8	NT_023811	AC104582	112386080	3	13600	0	0	13600
S/G/Y/R/B/O	NT_023811	AP002980	112258719	3			AP005363	112386080		23590	0	0	23590
S/G/Y/R/B/O	NT_023811	AC104582	112386080	3	chr8	NT_023811	AC020692	112508265	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC104582	112386080	3			AC010756	112386080		35612	0	29448	65060
S/G/Y/R/B/O	NT_023811	AC104582	112386080	3			AC015646	112386080		41002	0	11298	52300
S/G/Y/R/B/O	NT_023811	AC104582	112386080	3			AC036233	112386080		56435	4175	13547	74157
S/G/Y/R/B/O	NT_023811	AC104582	112386080	3			AC083790	112386080		89617	0	0	89617
S/G/Y/R/B/O	NT_023811	AC020692	112508265	3	chr8	NT_023811	AC022360	112676507	3	6248	0	0	6248
S/G/Y/R/B/O	NT_023811	AC020692	112508265	3			AC010756	112258719		14220	0	39592	53812
S/G/Y/R/B/O	NT_023811	AC020692	112508265	3			AC015646	112258719		65848	0	2922	68770
S/G/Y/R/B/O	NT_023811	AC020692	112508265	3			AC036233	112676507		53555	0	541	54096
S/G/Y/R/B/O	NT_023811	AC022360	112676507	3	chr8	NT_023811	AC040965	112842250	3	2355	0	0	2355
S/G/Y/R/B/O	NT_023811	AC040965	112842250	3	chr8	NT_023811	AC105038	113029083	2	27780	0	0	27780
S/G/Y/R/B/O	NT_023811	AC040965	112842250	3			AC021548	112842250		31498	3967	1295	36760
S/G/Y/R/B/O	NT_023811	AC105038	113029083	2	chr8	NT_023811	AC068954	113090646	3	9009	0	0	9009
S/G/Y/R/B/O	NT_023811	AC105038	113029083	2			AC021548	113029083		93442	1637	1119	96198
S/G/Y/R/B/O	NT_023811	AC068954	113090646	3	chr8	NT_023811	AC007719	113254187	3	0	0	14854	14854
S/G/Y/R/B/O	NT_023811	AC007719	113254187	3	chr8	NT_023811	AC024996	113389924	3	0	1405	0	1405
S/G/Y/R/B/O	NT_023811	AC024996	113389924	3	chr8	NT_023811	AC087710	113566383	3	80961	0	0	80961
S/G/Y/R/B/O	NT_023811	AC024996	113389924	3			AC019042	113254187		81800	0	0	81800
S/G/Y/R/B/O	NT_023811	AC087710	113566383	3	chr8	NT_023811	AP002979	113582068	3	70465	0	0	70465
S/G/Y/R/B/O	NT_023811	AC087710	113566383	3			AC019042	113566383		114394	0	0	114394
S/G/Y/R/B/O	NT_023811	AP002979	113582068	3	chr8	NT_023811	AC104380	113735715	3	87547	0	0	87547
S/G/Y/R/B/O	NT_023811	AP002979	113582068	3			AC019042	113582068		17762	0	0	17762
S/G/Y/R/B/O	NT_023811	AC104380	113735715	3	chr8	NT_023811	AP003470	113807571	3	45790	0	0	45790
S/G/Y/R/B/O	NT_023811	AP003470	113807571	3	chr8	NT_023811	AC009424	113919440	3	120934	0	0	120934
S/G/Y/R/B/O	NT_023811	AC009424	113919440	3	chr8	NT_023811	AC021264	113937918	3	0	1997	0	1997
S/G/Y/R/B/O	NT_023811	AC021264	113937918	3	chr8	NT_023811	AC027189	114053000	3	24580	0	0	24580
S/G/Y/R/B/O	NT_023811	AC027189	114053000	3	chr8	NT_023811	AC022605	114185744	3	90612	0	0	90612
S/G/Y/R/B/O	NT_023811	AC027189	114053000	3	chr8	NT_023811	AC067903	114264007	3	22298	0	0	22298
S/G/Y/R/B/O	NT_023811	AC022605	114185744	3	chr8	NT_023811	AC067903	114264007	3	100560	0	0	100560
S/G/Y/R/B/O	NT_023811	AC067903	114264007	3	chr8	NT_023811	AC107890	114361857	3	38019	0	0	38019
S/G/Y/R/B/O	NT_023811	AC067903	114264007	3	chr8	NT_023811	AC027189	114053000	3	22298	0	0	22298
S/G/Y/R/B/O	NT_023811	AC107890	114361857	3	chr8	NT_023811	AC055788	114494377	3	72638	0	0	72638
S/G/Y/R/B/O	NT_023811	AC107890	114361857	3			AC022204	114361857		76163	0	6553	82716
S/G/Y/R/B/O	NT_023811	AC055788	114494377	3	chr8	NT_023811	AC084341	114567152	1	23874	0	0	23874
S/G/Y/R/B/O	NT_023811	AC055788	114494377	3			AC022204	114264007		121002	0	0	121002
S/G/Y/R/B/O	NT_023811	AC084341	114567152	1	chr8	NT_023811	AC103993	114636907	3	21875	0	0	21875
S/G/Y/R/B/O	NT_023811	AC084341	114567152	1			AC022204	114361857		48295	0	0	48295
S/G/Y/R/B/O	NT_023811	AC084341	114567152	1			AC022204	114361857		48295	0	0	48295
S/G/Y/R/B/O	NT_023811	AC103993	114636907	3	chr8	NT_023811	AC046175	114743737	3	40912	0	0	40912
S/G/Y/R/B/O	NT_023811	AC103993	114636907	3			AC018991	114636907		67031	0	0	67031
S/G/Y/R/B/O	NT_023811	AC046175	114743737	3	chr8	NT_023811	AC046174	114938709	3	7250	0	0	7250
S/G/Y/R/B/O	NT_023811	AC046175	114743737	3			AC015866	114567152		108918	0	0	108918
S/G/Y/R/B/O	NT_023811	AC046175	114743737	3			AC018991	114567152		147929	0	0	147929
S/G/Y/R/B/O	NT_023811	AC046175	114743737	3			AC090102	114938709		86018	0	0	86018
S/G/Y/R/B/O	NT_023811	AC046174	114938709	3	chr8	NT_023811	AC104246	115093078	3	58511	0	0	58511
S/G/Y/R/B/O	NT_023811	AC046174	114938709	3			AC090102	114743737		72776	0	2523	75299
S/G/Y/R/B/O	NT_023811	AC104246	115093078	3	chr8	NT_023811	AC064802	115204680	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC064802	115204680	3	chr8	NT_023811	AC025881	115383162	3	39515	0	0	39515
S/G/Y/R/B/O	NT_023811	AC025881	115383162	3	chr8	NT_023811	AC016494	115519694	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC016494	115519694	3	chr8	NT_023811	AC025828	115589453	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC025828	115589453	3	chr8	NT_023811	AC091639	115723288	3	103668	0	0	103668
S/G/Y/R/B/O	NT_023811	AC025828	115589453	3			AC067982	115204680		48870	0	0	48870
S/G/Y/R/B/O	NT_023811	AC091639	115723288	3	chr8	NT_023811	AC019246	115767097	3	14768	0	0	14768
S/G/Y/R/B/O	NT_023811	AC019246	115767097	3	chr8	NT_023811	AC103864	115907311	3	142772	0	0	142772
S/G/Y/R/B/O	NT_023811	AC103864	115907311	3	chr8	NT_023811	AC023926	115929405	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC023926	115929405	3	chr8	NT_023811	AC012238	116059010	3	33545	0	0	33545
S/G/Y/R/B/O	NT_023811	AC012238	116059010	3	chr8	NT_023811	AC025479	116193919	3	85095	0	0	85095
S/G/Y/R/B/O	NT_023811	AC025479	116193919	3	chr8	NT_023811	AC068399	116285422	3	54748	0	0	54748
S/G/Y/R/B/O	NT_023811	AC025479	116193919	3			AF284562	116285422		22362	0	0	22362
S/G/Y/R/B/O	NT_023811	AC025479	116193919	3			AP005366	116285422		35546	0	33422	68968
S/G/Y/R/B/O	NT_023811	AC068399	116285422	3	chr8	NT_023811	AC013815	116425972	2	28988	0	0	28988
S/G/Y/R/B/O	NT_023811	AC068399	116285422	3			AF284562	116193919		113987	0	2395	116382
S/G/Y/R/B/O	NT_023811	AC068399	116285422	3			AP005366	116193919		21981	0	9682	31663
S/G/Y/R/B/O	NT_023811	AC013815	116425972	2	chr8	NT_023811	AF178030	116451875	3	0	0	20250	20250
S/G/Y/R/B/O	NT_023811	AC013815	116425972	2			AF284562	116451875		92427	2207	154	94788
S/G/Y/R/B/O	NT_023811	AC013815	116425972	2			AF284562	116451875		92427	2207	154	94788
S/G/Y/R/B/O	NT_023811	AF178030	116451875	3	chr8	NT_023811	AF130342	116761876	3	32803	0	0	32803
S/G/Y/R/B/O	NT_023811	AF178030	116451875	3			AC013789	116451875		154032	1980	0	156012
S/G/Y/R/B/O	NT_023811	AF178030	116451875	3			AC023142	116425972		84554	2051	38810	125415
S/G/Y/R/B/O	NT_023811	AF178030	116451875	3			AC084171	116425972		82418	0	0	82418
S/G/Y/R/B/O	NT_023811	AF130342	116761876	3	chr8	NT_023811	AC103863	117079043	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AF130342	116761876	3			AC013789	116761876		20542	1980	0	22522
S/G/Y/R/B/O	NT_023811	AF130342	116761876	3			AC073491	116761876		97672	0	28773	126445
S/G/Y/R/B/O	NT_023811	AF130342	116761876	3			AC084171	116761876		17620	0	0	17620
S/G/Y/R/B/O	NT_023811	AF130342	116761876	3			AC091174	116761876		126408	0	0	126408
S/G/Y/R/B/O	NT_023811	AC103863	117079043	3	chr8	NT_023811	AF130343	117219918	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AF130343	117219918	3	chr8	NT_023811	AC090994	117371796	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AF130343	117219918	3			AC016377	116451875		177837	2453	0	180290
S/G/Y/R/B/O	NT_023811	AF130343	117219918	3			AC073959	116451875		50765	0	20234	70999
S/G/Y/R/B/O	NT_023811	AC090994	117371796	3	chr8	NT_023811	AC105177	117476205	3	0	1914	0	1914
S/G/Y/R/B/O	NT_023811	AC090994	117371796	3			AC016377	116451875		59800	0	0	59800
S/G/Y/R/B/O	NT_023811	AC090994	117371796	3			AC073959	116451875		91414	4217	53173	148804
S/G/Y/R/B/O	NT_023811	AC105177	117476205	3	chr8	NT_023811	AC023520	117623417	3	27765	0	0	27765
S/G/Y/R/B/O	NT_023811	AC105177	117476205	3			AC012247	117476205		27765	0	0	27765
S/G/Y/R/B/O	NT_023811	AC023520	117623417	3	chr8	NT_023811	AP002905	117730426	3	37853	0	0	37853
S/G/Y/R/B/O	NT_023811	AC023520	117623417	3			AC012247	117371796		134768	0	0	134768
S/G/Y/R/B/O	NT_023811	AP002905	117730426	3	chr8	NT_023811	AC087350	117850974	3	5325	0	0	5325
S/G/Y/R/B/O	NT_023811	AP002905	117730426	3			AC012247	117730426		37852	0	0	37852
S/G/Y/R/B/O	NT_023811	AP002905	117730426	3			AC091707	117850974		61181	0	18995	80176
S/G/Y/R/B/O	NT_023811	AC087350	117850974	3	chr8	NT_023811	AC104391	118038999	3	111462	0	0	111462
S/G/Y/R/B/O	NT_023811	AC087350	117850974	3			AC016729	117850974		90103	0	95149	185252
S/G/Y/R/B/O	NT_023811	AC087350	117850974	3			AC091707	117850974		15605	0	0	15605
S/G/Y/R/B/O	NT_023811	AC104391	118038999	3	chr8	NT_023811	AC027419	118075757	3	11825	0	0	11825
S/G/Y/R/B/O	NT_023811	AC104391	118038999	3			AC016729	117730426		17721	0	93424	111145
S/G/Y/R/B/O	NT_023811	AC027419	118075757	3	chr8	NT_023811	AC084114	118236807	3	53567	0	0	53567
S/G/Y/R/B/O	NT_023811	AC027419	118075757	3			AC079196	117850974		75108	4251	4646	84005
S/G/Y/R/B/O	NT_023811	AC084114	118236807	3	chr8	NT_023811	AP002848	118372367	3	69692	0	0	69692
S/G/Y/R/B/O	NT_023811	AC084114	118236807	3			AC026258	118038999		83294	0	0	83294
S/G/Y/R/B/O	NT_023811	AC084114	118236807	3			AC079196	118075757		114232	4251	3440	121923
S/G/Y/R/B/O	NT_023811	AP002848	118372367	3	chr8	NT_023811	AC024329	118485647	3	40014	0	0	40014
S/G/Y/R/B/O	NT_023811	AP002848	118372367	3			AC026258	118485647		156964	0	0	156964
S/G/Y/R/B/O	NT_023811	AP002848	118372367	3			AC079196	118485647		45748	0	453	46201
S/G/Y/R/B/O	NT_023811	AC024329	118485647	3	chr8	NT_023811	AC087361	118604510	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AC024329	118485647	3			AC022528	118236807		16332	0	0	16332
S/G/Y/R/B/O	NT_023811	AC024329	118485647	3			AC026258	118236807		14101	0	0	14101
S/G/Y/R/B/O	NT_023811	AC087361	118604510	3	chr8	NT_023811	AC107628	118729725	3	47576	0	0	47576
S/G/Y/R/B/O	NT_023811	AC087361	118604510	3			AC022528	118372367		139961	0	1190	141151
S/G/Y/R/B/O	NT_023811	AC087361	118604510	3			AC034164	118372367		14793	2493	36858	54144
S/G/Y/R/B/O	NT_023811	AC107628	118729725	3	chr8	NT_023811	AF186189	118784809	3	17566	0	0	17566
S/G/Y/R/B/O	NT_023811	AC107628	118729725	3			AC022528	118729725		47450	0	0	47450
S/G/Y/R/B/O	NT_023811	AC107628	118729725	3			AC034164	118729725		65803	5481	25641	96925
S/G/Y/R/B/O	NT_023811	AF186189	118784809	3	chr8	NT_023811	AC113188	118839348	3	29280	0	0	29280
S/G/Y/R/B/O	NT_023811	AF186189	118784809	3			AC034164	118784809		34372	2992	23233	60597
S/G/Y/R/B/O	NT_023811	AC113188	118839348	3	chr8	NT_023811	AC021937	119004639	3	12069	0	0	12069
S/G/Y/R/B/O	NT_023811	AC113188	118839348	3			AC034164	119004639		23725	0	1947	25672
S/G/Y/R/B/O	NT_023811	AC021937	119004639	3	chr8	NT_023811	AP003476	119156902	3	50980	0	0	50980
S/G/Y/R/B/O	NT_023811	AC021937	119004639	3			AC020988	118784809		59368	2449	3641	65458
S/G/Y/R/B/O	NT_023811	AC021937	119004639	3			AC024352	118784809		24629	6160	3985	34774
S/G/Y/R/B/O	NT_023811	AC021937	119004639	3			AC087845	118784809		55430	1900	0	57330
S/G/Y/R/B/O	NT_023811	AP003476	119156902	3	chr8	NT_023811	AP003493	119285538	3	24880	0	0	24880
S/G/Y/R/B/O	NT_023811	AP003476	119156902	3			AC020988	119156902		103513	8744	27860	140117
S/G/Y/R/B/O	NT_023811	AP003476	119156902	3			AC024352	119004639		68554	22657	30870	122081
S/G/Y/R/B/O	NT_023811	AP003476	119156902	3			AC087845	119004639		87306	3406	3033	93745
S/G/Y/R/B/O	NT_023811	AP003493	119285538	3	chr8	NT_023811	AC023590	119417236	3	107682	0	0	107682
S/G/Y/R/B/O	NT_023811	AP003493	119285538	3			AC024352	119417236		30155	13870	12083	56108
S/G/Y/R/B/O	NT_023811	AC023590	119417236	3	chr8	NT_023811	AP003496	119485051	3	60855	0	0	60855
S/G/Y/R/B/O	NT_023811	AP003496	119485051	3	chr8	NT_023811	AP003494	119542947	3	84371	0	0	84371
S/G/Y/R/B/O	NT_023811	AP003494	119542947	3	chr8	NT_023811	AP003468	119642248	3	26175	0	0	26175
S/G/Y/R/B/O	NT_023811	AP003468	119642248	3	chr8	NT_023811	AP004217	119793588	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AP004217	119793588	3	chr8	NT_023811	AP004283	119929627	3	0	0	0	0
S/G/Y/R/B/O	NT_023811	AP004217	119793588	3			AC025293	119542947		49642	0	1523	51165
S/G/Y/R/B/O	NT_023811	AP004217	119793588	3			AC068953	119542947		30988	0	0	30988
S/G/Y/R/B/O	NT_023811	AP004283	119929627	3	chr8	NT_023811	AC107953	120028283	3	15968	0	0	15968
S/G/Y/R/B/O	NT_023811	AP004283	119929627	3			AC023487	119542947		23620	0	0	23620
S/G/Y/R/B/O	NT_023811	AP004283	119929627	3			AC025293	119542947		17762	0	4101	21863
S/G/Y/R/B/O	NT_023811	AP004283	119929627	3			AC100811	119542947		136288	0	0	136288
S/G/Y/R/B/O	NT_023811	AC107953	120028283	3
S/G/Y/R/B/O	NT_023811	AC107953	120028283	3			AC023487	120028283		65309	0	0	65309
S/G/Y/R/B/O	NT_023811	AC107953	120028283	3			AC080033	120028283		36326	0	0	36326